Gene : Eucgr.D02466 E. grandis v2.0
Defline:  (1 of 3) 2.2.1.1 - Transketolase / Glycoaldehyde transferase Genomic Order:  2053
Name:  ? Eucgr.D02466 Secondary Identifier:  ? PAC:32051895
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CALVIN-PWY Eucalyptus grandis pathologic  
Egrandis NONOXIPENT-PWY Eucalyptus grandis pathologic  
Egrandis PENTOSE-P-PWY Eucalyptus grandis pathologic  
Egrandis PHOTOALL-PWY Eucalyptus grandis pathologic  
Egrandis PWY-5723 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02466 0.5kb upstream 0.5kb upstream 4846 true Chr04: 38439472-38444317 Eucalyptus grandis
Eucgr.D02466 0.5kb upstream 0.5kb upstream 500 false Chr04: 38439472-38439971 Eucalyptus grandis
Eucgr.D02466 0.5kb downstream 0.5kb downstream 4846 true Chr04: 38439972-38444817 Eucalyptus grandis
Eucgr.D02466 0.5kb downstream 0.5kb downstream 500 false Chr04: 38444318-38444817 Eucalyptus grandis
Eucgr.D02466 1.0kb upstream 1.0kb upstream 5346 true Chr04: 38438972-38444317 Eucalyptus grandis
Eucgr.D02466 1.0kb upstream 1.0kb upstream 1000 false Chr04: 38438972-38439971 Eucalyptus grandis
Eucgr.D02466 1.0kb downstream 1.0kb downstream 5346 true Chr04: 38439972-38445317 Eucalyptus grandis
Eucgr.D02466 1.0kb downstream 1.0kb downstream 1000 false Chr04: 38444318-38445317 Eucalyptus grandis
Eucgr.D02466 2.0kb upstream 2.0kb upstream 6346 true Chr04: 38437972-38444317 Eucalyptus grandis
Eucgr.D02466 2.0kb upstream 2.0kb upstream 2000 false Chr04: 38437972-38439971 Eucalyptus grandis
Eucgr.D02466 2.0kb downstream 2.0kb downstream 6346 true Chr04: 38439972-38446317 Eucalyptus grandis
Eucgr.D02466 2.0kb downstream 2.0kb downstream 2000 false Chr04: 38444318-38446317 Eucalyptus grandis
Eucgr.D02466 5.0kb upstream 5.0kb upstream 9346 true Chr04: 38434972-38444317 Eucalyptus grandis
Eucgr.D02466 5.0kb upstream 5.0kb upstream 5000 false Chr04: 38434972-38439971 Eucalyptus grandis
Eucgr.D02466 5.0kb downstream 5.0kb downstream 9346 true Chr04: 38439972-38449317 Eucalyptus grandis
Eucgr.D02466 5.0kb downstream 5.0kb downstream 5000 false Chr04: 38444318-38449317 Eucalyptus grandis
Eucgr.D02466 10.0kb upstream 10.0kb upstream 14346 true Chr04: 38429972-38444317 Eucalyptus grandis
Eucgr.D02466 10.0kb upstream 10.0kb upstream 10000 false Chr04: 38429972-38439971 Eucalyptus grandis
Eucgr.D02466 10.0kb downstream 10.0kb downstream 14346 true Chr04: 38439972-38454317 Eucalyptus grandis
Eucgr.D02466 10.0kb downstream 10.0kb downstream 10000 false Chr04: 38444318-38454317 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064977 5270 Rosid View MSA
123741287 5271 Pentapetalae View MSA
122787703 5272 Eudicot View MSA
122048752 5273 Angiosperm View MSA
121350420 5274 Embryophyte View MSA
123423818 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.3544 0.0 149.154 High  
cufflinks 180.534 0.0 467.959 High High
cufflinks 49.2629 0.0 112.099 High  
cufflinks 146.944 0.0 370.629 High High
cufflinks 21.7856 0.0 48.2074   Low
cufflinks 20.0104 0.0 44.2557   Low

0 Strain