Gene : Eucgr.D02444 E. grandis v2.0
Defline:  (1 of 12) PF09335 - SNARE associated Golgi protein (SNARE_assoc) Genomic Order:  2033
Name:  ? Eucgr.D02444 Secondary Identifier:  ? PAC:32050487
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02444 0.5kb upstream 0.5kb upstream 2390 true Chr04: 38095252-38097641 Eucalyptus grandis
Eucgr.D02444 0.5kb upstream 0.5kb upstream 500 false Chr04: 38097142-38097641 Eucalyptus grandis
Eucgr.D02444 0.5kb downstream 0.5kb downstream 2390 true Chr04: 38094752-38097141 Eucalyptus grandis
Eucgr.D02444 0.5kb downstream 0.5kb downstream 500 false Chr04: 38094752-38095251 Eucalyptus grandis
Eucgr.D02444 1.0kb upstream 1.0kb upstream 2890 true Chr04: 38095252-38098141 Eucalyptus grandis
Eucgr.D02444 1.0kb upstream 1.0kb upstream 1000 false Chr04: 38097142-38098141 Eucalyptus grandis
Eucgr.D02444 1.0kb downstream 1.0kb downstream 2890 true Chr04: 38094252-38097141 Eucalyptus grandis
Eucgr.D02444 1.0kb downstream 1.0kb downstream 1000 false Chr04: 38094252-38095251 Eucalyptus grandis
Eucgr.D02444 2.0kb upstream 2.0kb upstream 3890 true Chr04: 38095252-38099141 Eucalyptus grandis
Eucgr.D02444 2.0kb upstream 2.0kb upstream 2000 false Chr04: 38097142-38099141 Eucalyptus grandis
Eucgr.D02444 2.0kb downstream 2.0kb downstream 3890 true Chr04: 38093252-38097141 Eucalyptus grandis
Eucgr.D02444 2.0kb downstream 2.0kb downstream 2000 false Chr04: 38093252-38095251 Eucalyptus grandis
Eucgr.D02444 5.0kb upstream 5.0kb upstream 6890 true Chr04: 38095252-38102141 Eucalyptus grandis
Eucgr.D02444 5.0kb upstream 5.0kb upstream 5000 false Chr04: 38097142-38102141 Eucalyptus grandis
Eucgr.D02444 5.0kb downstream 5.0kb downstream 6890 true Chr04: 38090252-38097141 Eucalyptus grandis
Eucgr.D02444 5.0kb downstream 5.0kb downstream 5000 false Chr04: 38090252-38095251 Eucalyptus grandis
Eucgr.D02444 10.0kb upstream 10.0kb upstream 11890 true Chr04: 38095252-38107141 Eucalyptus grandis
Eucgr.D02444 10.0kb upstream 10.0kb upstream 10000 false Chr04: 38097142-38107141 Eucalyptus grandis
Eucgr.D02444 10.0kb downstream 10.0kb downstream 11890 true Chr04: 38085252-38097141 Eucalyptus grandis
Eucgr.D02444 10.0kb downstream 10.0kb downstream 10000 false Chr04: 38085252-38095251 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124075265 5270 Rosid View MSA
123755095 5271 Pentapetalae View MSA
122776400 5272 Eudicot View MSA
122051271 5273 Angiosperm View MSA
121349848 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain