Gene : Eucgr.D02433 E. grandis v2.0
Defline:  (1 of 2) PTHR10774:SF51 - C2 CALCIUM/LIPID-BINDING ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE-RELATED Genomic Order:  2022
Name:  ? Eucgr.D02433 Secondary Identifier:  ? PAC:32051864
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02433 0.5kb upstream 0.5kb upstream 8267 true Chr04: 37971893-37980159 Eucalyptus grandis
Eucgr.D02433 0.5kb upstream 0.5kb upstream 500 false Chr04: 37979660-37980159 Eucalyptus grandis
Eucgr.D02433 0.5kb downstream 0.5kb downstream 8267 true Chr04: 37971393-37979659 Eucalyptus grandis
Eucgr.D02433 0.5kb downstream 0.5kb downstream 500 false Chr04: 37971393-37971892 Eucalyptus grandis
Eucgr.D02433 1.0kb upstream 1.0kb upstream 8767 true Chr04: 37971893-37980659 Eucalyptus grandis
Eucgr.D02433 1.0kb upstream 1.0kb upstream 1000 false Chr04: 37979660-37980659 Eucalyptus grandis
Eucgr.D02433 1.0kb downstream 1.0kb downstream 8767 true Chr04: 37970893-37979659 Eucalyptus grandis
Eucgr.D02433 1.0kb downstream 1.0kb downstream 1000 false Chr04: 37970893-37971892 Eucalyptus grandis
Eucgr.D02433 2.0kb upstream 2.0kb upstream 9767 true Chr04: 37971893-37981659 Eucalyptus grandis
Eucgr.D02433 2.0kb upstream 2.0kb upstream 2000 false Chr04: 37979660-37981659 Eucalyptus grandis
Eucgr.D02433 2.0kb downstream 2.0kb downstream 9767 true Chr04: 37969893-37979659 Eucalyptus grandis
Eucgr.D02433 2.0kb downstream 2.0kb downstream 2000 false Chr04: 37969893-37971892 Eucalyptus grandis
Eucgr.D02433 5.0kb upstream 5.0kb upstream 12767 true Chr04: 37971893-37984659 Eucalyptus grandis
Eucgr.D02433 5.0kb upstream 5.0kb upstream 5000 false Chr04: 37979660-37984659 Eucalyptus grandis
Eucgr.D02433 5.0kb downstream 5.0kb downstream 12767 true Chr04: 37966893-37979659 Eucalyptus grandis
Eucgr.D02433 5.0kb downstream 5.0kb downstream 5000 false Chr04: 37966893-37971892 Eucalyptus grandis
Eucgr.D02433 10.0kb upstream 10.0kb upstream 17767 true Chr04: 37971893-37989659 Eucalyptus grandis
Eucgr.D02433 10.0kb upstream 10.0kb upstream 10000 false Chr04: 37979660-37989659 Eucalyptus grandis
Eucgr.D02433 10.0kb downstream 10.0kb downstream 17767 true Chr04: 37961893-37979659 Eucalyptus grandis
Eucgr.D02433 10.0kb downstream 10.0kb downstream 10000 false Chr04: 37961893-37971892 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067167 5270 Rosid View MSA
123748686 5271 Pentapetalae View MSA
122791345 5272 Eudicot View MSA
122044587 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121346327 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.1405 0.0 57.8256   Low
cufflinks 137.952 0.0 327.184 High  
cufflinks 100.293 0.0 232.16 High  
cufflinks 44.0953 0.0 98.0715 High  
cufflinks 55.0491 0.0 123.115 High  
cufflinks 178.558 0.0 431.57 High High

0 Strain