Gene : Eucgr.D02377 E. grandis v2.0
Defline:  (1 of 2) PTHR31446:SF4 - ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN Genomic Order:  1973
Name:  ? Eucgr.D02377 Secondary Identifier:  ? PAC:32051373
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02377 0.5kb upstream 0.5kb upstream 3348 true Chr04: 36992892-36996239 Eucalyptus grandis
Eucgr.D02377 0.5kb upstream 0.5kb upstream 500 false Chr04: 36992892-36993391 Eucalyptus grandis
Eucgr.D02377 0.5kb downstream 0.5kb downstream 3348 true Chr04: 36993392-36996739 Eucalyptus grandis
Eucgr.D02377 0.5kb downstream 0.5kb downstream 500 false Chr04: 36996240-36996739 Eucalyptus grandis
Eucgr.D02377 1.0kb upstream 1.0kb upstream 3848 true Chr04: 36992392-36996239 Eucalyptus grandis
Eucgr.D02377 1.0kb upstream 1.0kb upstream 1000 false Chr04: 36992392-36993391 Eucalyptus grandis
Eucgr.D02377 1.0kb downstream 1.0kb downstream 3848 true Chr04: 36993392-36997239 Eucalyptus grandis
Eucgr.D02377 1.0kb downstream 1.0kb downstream 1000 false Chr04: 36996240-36997239 Eucalyptus grandis
Eucgr.D02377 2.0kb upstream 2.0kb upstream 4848 true Chr04: 36991392-36996239 Eucalyptus grandis
Eucgr.D02377 2.0kb upstream 2.0kb upstream 2000 false Chr04: 36991392-36993391 Eucalyptus grandis
Eucgr.D02377 2.0kb downstream 2.0kb downstream 4848 true Chr04: 36993392-36998239 Eucalyptus grandis
Eucgr.D02377 2.0kb downstream 2.0kb downstream 2000 false Chr04: 36996240-36998239 Eucalyptus grandis
Eucgr.D02377 5.0kb upstream 5.0kb upstream 7848 true Chr04: 36988392-36996239 Eucalyptus grandis
Eucgr.D02377 5.0kb upstream 5.0kb upstream 5000 false Chr04: 36988392-36993391 Eucalyptus grandis
Eucgr.D02377 5.0kb downstream 5.0kb downstream 7848 true Chr04: 36993392-37001239 Eucalyptus grandis
Eucgr.D02377 5.0kb downstream 5.0kb downstream 5000 false Chr04: 36996240-37001239 Eucalyptus grandis
Eucgr.D02377 10.0kb upstream 10.0kb upstream 12848 true Chr04: 36983392-36996239 Eucalyptus grandis
Eucgr.D02377 10.0kb upstream 10.0kb upstream 10000 false Chr04: 36983392-36993391 Eucalyptus grandis
Eucgr.D02377 10.0kb downstream 10.0kb downstream 12848 true Chr04: 36993392-37006239 Eucalyptus grandis
Eucgr.D02377 10.0kb downstream 10.0kb downstream 10000 false Chr04: 36996240-37006239 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066733 5270 Rosid View MSA
123749818 5271 Pentapetalae View MSA
122786289 5272 Eudicot View MSA
122043661 5273 Angiosperm View MSA
123429132 5275 Viridiplantae View MSA
121346257 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.56231 0.0 14.0478    
cufflinks 1.1314 0.0 3.3481   Low
cufflinks 3.04506 0.0 8.1692    
cufflinks 1.93863 0.0 5.42077    
cufflinks 2.87017 0.0 7.75116    
cufflinks 7.05091 0.0 17.3699   High

0 Strain