Gene : Eucgr.D02327 E. grandis v2.0
Defline:  (1 of 80) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  1929
Name:  ? Eucgr.D02327 Secondary Identifier:  ? PAC:32050691
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02327 0.5kb upstream 0.5kb upstream 1506 true Chr04: 36505175-36506680 Eucalyptus grandis
Eucgr.D02327 0.5kb upstream 0.5kb upstream 500 false Chr04: 36505175-36505674 Eucalyptus grandis
Eucgr.D02327 0.5kb downstream 0.5kb downstream 1506 true Chr04: 36505675-36507180 Eucalyptus grandis
Eucgr.D02327 0.5kb downstream 0.5kb downstream 500 false Chr04: 36506681-36507180 Eucalyptus grandis
Eucgr.D02327 1.0kb upstream 1.0kb upstream 2006 true Chr04: 36504675-36506680 Eucalyptus grandis
Eucgr.D02327 1.0kb upstream 1.0kb upstream 1000 false Chr04: 36504675-36505674 Eucalyptus grandis
Eucgr.D02327 1.0kb downstream 1.0kb downstream 2006 true Chr04: 36505675-36507680 Eucalyptus grandis
Eucgr.D02327 1.0kb downstream 1.0kb downstream 1000 false Chr04: 36506681-36507680 Eucalyptus grandis
Eucgr.D02327 2.0kb upstream 2.0kb upstream 3006 true Chr04: 36503675-36506680 Eucalyptus grandis
Eucgr.D02327 2.0kb upstream 2.0kb upstream 2000 false Chr04: 36503675-36505674 Eucalyptus grandis
Eucgr.D02327 2.0kb downstream 2.0kb downstream 3006 true Chr04: 36505675-36508680 Eucalyptus grandis
Eucgr.D02327 2.0kb downstream 2.0kb downstream 2000 false Chr04: 36506681-36508680 Eucalyptus grandis
Eucgr.D02327 5.0kb upstream 5.0kb upstream 6006 true Chr04: 36500675-36506680 Eucalyptus grandis
Eucgr.D02327 5.0kb upstream 5.0kb upstream 5000 false Chr04: 36500675-36505674 Eucalyptus grandis
Eucgr.D02327 5.0kb downstream 5.0kb downstream 6006 true Chr04: 36505675-36511680 Eucalyptus grandis
Eucgr.D02327 5.0kb downstream 5.0kb downstream 5000 false Chr04: 36506681-36511680 Eucalyptus grandis
Eucgr.D02327 10.0kb upstream 10.0kb upstream 11006 true Chr04: 36495675-36506680 Eucalyptus grandis
Eucgr.D02327 10.0kb upstream 10.0kb upstream 10000 false Chr04: 36495675-36505674 Eucalyptus grandis
Eucgr.D02327 10.0kb downstream 10.0kb downstream 11006 true Chr04: 36505675-36516680 Eucalyptus grandis
Eucgr.D02327 10.0kb downstream 10.0kb downstream 10000 false Chr04: 36506681-36516680 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063327 5270 Rosid View MSA
123749565 5271 Pentapetalae View MSA
122795600 5272 Eudicot View MSA
122043658 5273 Angiosperm View MSA
121348077 5274 Embryophyte View MSA
123380721 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 102.783 0.0 228.332 High Low
cufflinks 379.049 0.0 906.465 High  
cufflinks 121.142 0.0 269.582 High  
cufflinks 366.077 0.0 869.806 High  
cufflinks 714.202 0.0 1841.76 High High
cufflinks 158.868 0.0 360.576 High  

0 Strain