Gene : Eucgr.D02295 E. grandis v2.0
Defline:  (1 of 3) PTHR22849:SF50 - U-BOX DOMAIN-CONTAINING PROTEIN 36-RELATED Genomic Order:  1899
Name:  ? Eucgr.D02295 Secondary Identifier:  ? PAC:32050352
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7511 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D02295 0.5kb upstream 0.5kb upstream 7719 true Chr04: 36256273-36263991 Eucalyptus grandis
Eucgr.D02295 0.5kb upstream 0.5kb upstream 500 false Chr04: 36256273-36256772 Eucalyptus grandis
Eucgr.D02295 0.5kb downstream 0.5kb downstream 7719 true Chr04: 36256773-36264491 Eucalyptus grandis
Eucgr.D02295 0.5kb downstream 0.5kb downstream 500 false Chr04: 36263992-36264491 Eucalyptus grandis
Eucgr.D02295 1.0kb upstream 1.0kb upstream 8219 true Chr04: 36255773-36263991 Eucalyptus grandis
Eucgr.D02295 1.0kb upstream 1.0kb upstream 1000 false Chr04: 36255773-36256772 Eucalyptus grandis
Eucgr.D02295 1.0kb downstream 1.0kb downstream 8219 true Chr04: 36256773-36264991 Eucalyptus grandis
Eucgr.D02295 1.0kb downstream 1.0kb downstream 1000 false Chr04: 36263992-36264991 Eucalyptus grandis
Eucgr.D02295 2.0kb upstream 2.0kb upstream 9219 true Chr04: 36254773-36263991 Eucalyptus grandis
Eucgr.D02295 2.0kb upstream 2.0kb upstream 2000 false Chr04: 36254773-36256772 Eucalyptus grandis
Eucgr.D02295 2.0kb downstream 2.0kb downstream 9219 true Chr04: 36256773-36265991 Eucalyptus grandis
Eucgr.D02295 2.0kb downstream 2.0kb downstream 2000 false Chr04: 36263992-36265991 Eucalyptus grandis
Eucgr.D02295 5.0kb upstream 5.0kb upstream 12219 true Chr04: 36251773-36263991 Eucalyptus grandis
Eucgr.D02295 5.0kb upstream 5.0kb upstream 5000 false Chr04: 36251773-36256772 Eucalyptus grandis
Eucgr.D02295 5.0kb downstream 5.0kb downstream 12219 true Chr04: 36256773-36268991 Eucalyptus grandis
Eucgr.D02295 5.0kb downstream 5.0kb downstream 5000 false Chr04: 36263992-36268991 Eucalyptus grandis
Eucgr.D02295 10.0kb upstream 10.0kb upstream 17219 true Chr04: 36246773-36263991 Eucalyptus grandis
Eucgr.D02295 10.0kb upstream 10.0kb upstream 10000 false Chr04: 36246773-36256772 Eucalyptus grandis
Eucgr.D02295 10.0kb downstream 10.0kb downstream 17219 true Chr04: 36256773-36273991 Eucalyptus grandis
Eucgr.D02295 10.0kb downstream 10.0kb downstream 10000 false Chr04: 36263992-36273991 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028010 5273 Angiosperm View MSA
124050747 5270 Rosid View MSA
123742120 5271 Pentapetalae View MSA
122770207 5272 Eudicot View MSA
121297566 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.93809 0.0 5.32152    
cufflinks 0.901034 0.0 2.6855   Low
cufflinks 3.33233 0.0 8.67933   High
cufflinks 2.9966 0.0 7.875    
cufflinks 1.99165 0.0 5.45279    
cufflinks 1.02034 0.0 2.99844   Low

0 Strain