Gene : Eucgr.E00298 E. grandis v2.0
Defline:  (1 of 2) PTHR31989:SF51 - F5D14.30 PROTEIN-RELATED Genomic Order:  272
Name:  ? Eucgr.E00298 Secondary Identifier:  ? PAC:32029268
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00298 0.5kb upstream 0.5kb upstream 2713 true Chr05: 2803890-2806602 Eucalyptus grandis
Eucgr.E00298 0.5kb upstream 0.5kb upstream 500 false Chr05: 2806103-2806602 Eucalyptus grandis
Eucgr.E00298 0.5kb downstream 0.5kb downstream 2713 true Chr05: 2803390-2806102 Eucalyptus grandis
Eucgr.E00298 0.5kb downstream 0.5kb downstream 500 false Chr05: 2803390-2803889 Eucalyptus grandis
Eucgr.E00298 1.0kb upstream 1.0kb upstream 3213 true Chr05: 2803890-2807102 Eucalyptus grandis
Eucgr.E00298 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2806103-2807102 Eucalyptus grandis
Eucgr.E00298 1.0kb downstream 1.0kb downstream 3213 true Chr05: 2802890-2806102 Eucalyptus grandis
Eucgr.E00298 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2802890-2803889 Eucalyptus grandis
Eucgr.E00298 2.0kb upstream 2.0kb upstream 4213 true Chr05: 2803890-2808102 Eucalyptus grandis
Eucgr.E00298 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2806103-2808102 Eucalyptus grandis
Eucgr.E00298 2.0kb downstream 2.0kb downstream 4213 true Chr05: 2801890-2806102 Eucalyptus grandis
Eucgr.E00298 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2801890-2803889 Eucalyptus grandis
Eucgr.E00298 5.0kb upstream 5.0kb upstream 7213 true Chr05: 2803890-2811102 Eucalyptus grandis
Eucgr.E00298 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2806103-2811102 Eucalyptus grandis
Eucgr.E00298 5.0kb downstream 5.0kb downstream 7213 true Chr05: 2798890-2806102 Eucalyptus grandis
Eucgr.E00298 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2798890-2803889 Eucalyptus grandis
Eucgr.E00298 10.0kb upstream 10.0kb upstream 12213 true Chr05: 2803890-2816102 Eucalyptus grandis
Eucgr.E00298 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2806103-2816102 Eucalyptus grandis
Eucgr.E00298 10.0kb downstream 10.0kb downstream 12213 true Chr05: 2793890-2806102 Eucalyptus grandis
Eucgr.E00298 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2793890-2803889 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063603 5270 Rosid View MSA
123753355 5271 Pentapetalae View MSA
122797864 5272 Eudicot View MSA
122051475 5273 Angiosperm View MSA
121312510 5274 Embryophyte View MSA
123349677 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.296092 0.0 1.20038 Low Low
cufflinks 1.71792 0.0 5.69479    
cufflinks 0.570519 0.0 1.95914    
cufflinks 5.63014 0.0 14.2636   High
cufflinks 1.48097 0.0 4.76372    
cufflinks 1.89935 0.0 5.4985    

0 Strain