Gene : Eucgr.E00302 E. grandis v2.0
Defline:  (1 of 235) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  276
Name:  ? Eucgr.E00302 Secondary Identifier:  ? PAC:32028993
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00302 0.5kb upstream 0.5kb upstream 2594 true Chr05: 2831212-2833805 Eucalyptus grandis
Eucgr.E00302 0.5kb upstream 0.5kb upstream 500 false Chr05: 2831212-2831711 Eucalyptus grandis
Eucgr.E00302 0.5kb downstream 0.5kb downstream 2594 true Chr05: 2831712-2834305 Eucalyptus grandis
Eucgr.E00302 0.5kb downstream 0.5kb downstream 500 false Chr05: 2833806-2834305 Eucalyptus grandis
Eucgr.E00302 1.0kb upstream 1.0kb upstream 3094 true Chr05: 2830712-2833805 Eucalyptus grandis
Eucgr.E00302 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2830712-2831711 Eucalyptus grandis
Eucgr.E00302 1.0kb downstream 1.0kb downstream 3094 true Chr05: 2831712-2834805 Eucalyptus grandis
Eucgr.E00302 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2833806-2834805 Eucalyptus grandis
Eucgr.E00302 2.0kb upstream 2.0kb upstream 4094 true Chr05: 2829712-2833805 Eucalyptus grandis
Eucgr.E00302 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2829712-2831711 Eucalyptus grandis
Eucgr.E00302 2.0kb downstream 2.0kb downstream 4094 true Chr05: 2831712-2835805 Eucalyptus grandis
Eucgr.E00302 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2833806-2835805 Eucalyptus grandis
Eucgr.E00302 5.0kb upstream 5.0kb upstream 7094 true Chr05: 2826712-2833805 Eucalyptus grandis
Eucgr.E00302 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2826712-2831711 Eucalyptus grandis
Eucgr.E00302 5.0kb downstream 5.0kb downstream 7094 true Chr05: 2831712-2838805 Eucalyptus grandis
Eucgr.E00302 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2833806-2838805 Eucalyptus grandis
Eucgr.E00302 10.0kb upstream 10.0kb upstream 12094 true Chr05: 2821712-2833805 Eucalyptus grandis
Eucgr.E00302 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2821712-2831711 Eucalyptus grandis
Eucgr.E00302 10.0kb downstream 10.0kb downstream 12094 true Chr05: 2831712-2843805 Eucalyptus grandis
Eucgr.E00302 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2833806-2843805 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065827 5270 Rosid View MSA
123753301 5271 Pentapetalae View MSA
122789942 5272 Eudicot View MSA
122043539 5273 Angiosperm View MSA
121344903 5274 Embryophyte View MSA
123380125 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.42824 0.0 8.46898    
cufflinks 0.279012 0.0 0.898269 Low  
cufflinks 3.27354 0.0 8.10236    
cufflinks 0.168153 0.0 0.577394 Low Low
cufflinks 0.595637 0.0 1.75715 Low  
cufflinks 9.37856 0.0 21.2953   High

0 Strain