Gene : Eucgr.E00310 E. grandis v2.0
Defline:  (1 of 1) PTHR13428 - INNER NUCLEAR MEMBRANE PROTEIN MAN1 LEM DOMAIN CONTAINING PROTEIN Genomic Order:  284
Name:  ? Eucgr.E00310 Secondary Identifier:  ? PAC:32029697
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00310 0.5kb upstream 0.5kb upstream 5913 true Chr05: 2899118-2905030 Eucalyptus grandis
Eucgr.E00310 0.5kb upstream 0.5kb upstream 500 false Chr05: 2904531-2905030 Eucalyptus grandis
Eucgr.E00310 0.5kb downstream 0.5kb downstream 5913 true Chr05: 2898618-2904530 Eucalyptus grandis
Eucgr.E00310 0.5kb downstream 0.5kb downstream 500 false Chr05: 2898618-2899117 Eucalyptus grandis
Eucgr.E00310 1.0kb upstream 1.0kb upstream 6413 true Chr05: 2899118-2905530 Eucalyptus grandis
Eucgr.E00310 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2904531-2905530 Eucalyptus grandis
Eucgr.E00310 1.0kb downstream 1.0kb downstream 6413 true Chr05: 2898118-2904530 Eucalyptus grandis
Eucgr.E00310 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2898118-2899117 Eucalyptus grandis
Eucgr.E00310 2.0kb upstream 2.0kb upstream 7413 true Chr05: 2899118-2906530 Eucalyptus grandis
Eucgr.E00310 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2904531-2906530 Eucalyptus grandis
Eucgr.E00310 2.0kb downstream 2.0kb downstream 7413 true Chr05: 2897118-2904530 Eucalyptus grandis
Eucgr.E00310 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2897118-2899117 Eucalyptus grandis
Eucgr.E00310 5.0kb upstream 5.0kb upstream 10413 true Chr05: 2899118-2909530 Eucalyptus grandis
Eucgr.E00310 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2904531-2909530 Eucalyptus grandis
Eucgr.E00310 5.0kb downstream 5.0kb downstream 10413 true Chr05: 2894118-2904530 Eucalyptus grandis
Eucgr.E00310 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2894118-2899117 Eucalyptus grandis
Eucgr.E00310 10.0kb upstream 10.0kb upstream 15413 true Chr05: 2899118-2914530 Eucalyptus grandis
Eucgr.E00310 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2904531-2914530 Eucalyptus grandis
Eucgr.E00310 10.0kb downstream 10.0kb downstream 15413 true Chr05: 2889118-2904530 Eucalyptus grandis
Eucgr.E00310 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2889118-2899117 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062152 5270 Rosid View MSA
123738040 5271 Pentapetalae View MSA
122785775 5272 Eudicot View MSA
122043959 5273 Angiosperm View MSA
121347546 5274 Embryophyte View MSA
123380568 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1129 0.0 25.2766    
cufflinks 11.3131 0.0 25.6511    
cufflinks 10.3094 0.0 23.5193    
cufflinks 7.66616 0.0 17.8416   Low
cufflinks 8.18827 0.0 19.0285   Low
cufflinks 10.8889 0.0 24.83    

0 Strain