Gene : Eucgr.E00265 E. grandis v2.0
Defline:  (1 of 5) KOG3140 - Predicted membrane protein Genomic Order:  240
Name:  ? Eucgr.E00265 Secondary Identifier:  ? PAC:32031091
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00265 0.5kb upstream 0.5kb upstream 2955 true Chr05: 2562923-2565877 Eucalyptus grandis
Eucgr.E00265 0.5kb upstream 0.5kb upstream 500 false Chr05: 2562923-2563422 Eucalyptus grandis
Eucgr.E00265 0.5kb downstream 0.5kb downstream 2955 true Chr05: 2563423-2566377 Eucalyptus grandis
Eucgr.E00265 0.5kb downstream 0.5kb downstream 500 false Chr05: 2565878-2566377 Eucalyptus grandis
Eucgr.E00265 1.0kb upstream 1.0kb upstream 3455 true Chr05: 2562423-2565877 Eucalyptus grandis
Eucgr.E00265 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2562423-2563422 Eucalyptus grandis
Eucgr.E00265 1.0kb downstream 1.0kb downstream 3455 true Chr05: 2563423-2566877 Eucalyptus grandis
Eucgr.E00265 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2565878-2566877 Eucalyptus grandis
Eucgr.E00265 2.0kb upstream 2.0kb upstream 4455 true Chr05: 2561423-2565877 Eucalyptus grandis
Eucgr.E00265 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2561423-2563422 Eucalyptus grandis
Eucgr.E00265 2.0kb downstream 2.0kb downstream 4455 true Chr05: 2563423-2567877 Eucalyptus grandis
Eucgr.E00265 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2565878-2567877 Eucalyptus grandis
Eucgr.E00265 5.0kb upstream 5.0kb upstream 7455 true Chr05: 2558423-2565877 Eucalyptus grandis
Eucgr.E00265 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2558423-2563422 Eucalyptus grandis
Eucgr.E00265 5.0kb downstream 5.0kb downstream 7455 true Chr05: 2563423-2570877 Eucalyptus grandis
Eucgr.E00265 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2565878-2570877 Eucalyptus grandis
Eucgr.E00265 10.0kb upstream 10.0kb upstream 12455 true Chr05: 2553423-2565877 Eucalyptus grandis
Eucgr.E00265 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2553423-2563422 Eucalyptus grandis
Eucgr.E00265 10.0kb downstream 10.0kb downstream 12455 true Chr05: 2563423-2575877 Eucalyptus grandis
Eucgr.E00265 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2565878-2575877 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068758 5270 Rosid View MSA
123751002 5271 Pentapetalae View MSA
122793414 5272 Eudicot View MSA
122043784 5273 Angiosperm View MSA
121348714 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.0282 0.0 130.677 High High
cufflinks 26.345 0.0 58.9362   Low
cufflinks 53.5921 0.0 118.525 High  
cufflinks 38.137 0.0 84.537 High  
cufflinks 37.2671 0.0 82.5854    
cufflinks 32.512 0.0 72.306    

0 Strain