Gene : Eucgr.E00280 E. grandis v2.0
Defline:  (1 of 1) PTHR24089:SF341 - MITOCHONDRIAL CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN Genomic Order:  255
Name:  ? Eucgr.E00280 Secondary Identifier:  ? PAC:32030400
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00280 0.5kb upstream 0.5kb upstream 4123 true Chr05: 2685769-2689891 Eucalyptus grandis
Eucgr.E00280 0.5kb upstream 0.5kb upstream 500 false Chr05: 2689392-2689891 Eucalyptus grandis
Eucgr.E00280 0.5kb downstream 0.5kb downstream 4123 true Chr05: 2685269-2689391 Eucalyptus grandis
Eucgr.E00280 0.5kb downstream 0.5kb downstream 500 false Chr05: 2685269-2685768 Eucalyptus grandis
Eucgr.E00280 1.0kb upstream 1.0kb upstream 4623 true Chr05: 2685769-2690391 Eucalyptus grandis
Eucgr.E00280 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2689392-2690391 Eucalyptus grandis
Eucgr.E00280 1.0kb downstream 1.0kb downstream 4623 true Chr05: 2684769-2689391 Eucalyptus grandis
Eucgr.E00280 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2684769-2685768 Eucalyptus grandis
Eucgr.E00280 2.0kb upstream 2.0kb upstream 5623 true Chr05: 2685769-2691391 Eucalyptus grandis
Eucgr.E00280 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2689392-2691391 Eucalyptus grandis
Eucgr.E00280 2.0kb downstream 2.0kb downstream 5623 true Chr05: 2683769-2689391 Eucalyptus grandis
Eucgr.E00280 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2683769-2685768 Eucalyptus grandis
Eucgr.E00280 5.0kb upstream 5.0kb upstream 8623 true Chr05: 2685769-2694391 Eucalyptus grandis
Eucgr.E00280 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2689392-2694391 Eucalyptus grandis
Eucgr.E00280 5.0kb downstream 5.0kb downstream 8623 true Chr05: 2680769-2689391 Eucalyptus grandis
Eucgr.E00280 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2680769-2685768 Eucalyptus grandis
Eucgr.E00280 10.0kb upstream 10.0kb upstream 13623 true Chr05: 2685769-2699391 Eucalyptus grandis
Eucgr.E00280 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2689392-2699391 Eucalyptus grandis
Eucgr.E00280 10.0kb downstream 10.0kb downstream 13623 true Chr05: 2675769-2689391 Eucalyptus grandis
Eucgr.E00280 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2675769-2685768 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065581 5270 Rosid View MSA
123738655 5271 Pentapetalae View MSA
122791854 5272 Eudicot View MSA
122045796 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121349185 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.6956 0.0 68.8442    
cufflinks 46.8646 0.0 127.065 High High
cufflinks 14.5211 0.0 42.4555    
cufflinks 35.1398 0.0 87.8033    
cufflinks 13.3714 0.0 35.4574    
cufflinks 15.2152 0.0 38.3047    

0 Strain