Gene : Eucgr.E00282 E. grandis v2.0
Defline:  (1 of 1) PTHR11081:SF23 - FLAP ENDONUCLEASE GEN HOMOLOG 1 Genomic Order:  257
Name:  ? Eucgr.E00282 Secondary Identifier:  ? PAC:32029191
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00282 0.5kb upstream 0.5kb upstream 5421 true Chr05: 2695353-2700773 Eucalyptus grandis
Eucgr.E00282 0.5kb upstream 0.5kb upstream 500 false Chr05: 2695353-2695852 Eucalyptus grandis
Eucgr.E00282 0.5kb downstream 0.5kb downstream 5421 true Chr05: 2695853-2701273 Eucalyptus grandis
Eucgr.E00282 0.5kb downstream 0.5kb downstream 500 false Chr05: 2700774-2701273 Eucalyptus grandis
Eucgr.E00282 1.0kb upstream 1.0kb upstream 5921 true Chr05: 2694853-2700773 Eucalyptus grandis
Eucgr.E00282 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2694853-2695852 Eucalyptus grandis
Eucgr.E00282 1.0kb downstream 1.0kb downstream 5921 true Chr05: 2695853-2701773 Eucalyptus grandis
Eucgr.E00282 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2700774-2701773 Eucalyptus grandis
Eucgr.E00282 2.0kb upstream 2.0kb upstream 6921 true Chr05: 2693853-2700773 Eucalyptus grandis
Eucgr.E00282 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2693853-2695852 Eucalyptus grandis
Eucgr.E00282 2.0kb downstream 2.0kb downstream 6921 true Chr05: 2695853-2702773 Eucalyptus grandis
Eucgr.E00282 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2700774-2702773 Eucalyptus grandis
Eucgr.E00282 5.0kb upstream 5.0kb upstream 9921 true Chr05: 2690853-2700773 Eucalyptus grandis
Eucgr.E00282 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2690853-2695852 Eucalyptus grandis
Eucgr.E00282 5.0kb downstream 5.0kb downstream 9921 true Chr05: 2695853-2705773 Eucalyptus grandis
Eucgr.E00282 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2700774-2705773 Eucalyptus grandis
Eucgr.E00282 10.0kb upstream 10.0kb upstream 14921 true Chr05: 2685853-2700773 Eucalyptus grandis
Eucgr.E00282 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2685853-2695852 Eucalyptus grandis
Eucgr.E00282 10.0kb downstream 10.0kb downstream 14921 true Chr05: 2695853-2710773 Eucalyptus grandis
Eucgr.E00282 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2700774-2710773 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071440 5270 Rosid View MSA
123738836 5271 Pentapetalae View MSA
122786263 5272 Eudicot View MSA
122047356 5273 Angiosperm View MSA
121351404 5274 Embryophyte View MSA
123425829 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.10564 0.0 9.94064    
cufflinks 3.86417 0.0 9.38105    
cufflinks 4.79822 0.0 11.4129    
cufflinks 3.53373 0.0 8.62485    
cufflinks 4.96459 0.0 11.7778    
cufflinks 1.48375 0.0 3.98767   Low

0 Strain