Gene : Eucgr.E00246 E. grandis v2.0
Defline:  (1 of 3) PTHR31496:SF10 - TRANSCRIPTION FACTOR KAN2-RELATED Genomic Order:  222
Name:  ? Eucgr.E00246 Secondary Identifier:  ? PAC:32028049
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00246 0.5kb upstream 0.5kb upstream 9753 true Chr05: 2412510-2422262 Eucalyptus grandis
Eucgr.E00246 0.5kb upstream 0.5kb upstream 500 false Chr05: 2421763-2422262 Eucalyptus grandis
Eucgr.E00246 0.5kb downstream 0.5kb downstream 9753 true Chr05: 2412010-2421762 Eucalyptus grandis
Eucgr.E00246 0.5kb downstream 0.5kb downstream 500 false Chr05: 2412010-2412509 Eucalyptus grandis
Eucgr.E00246 1.0kb upstream 1.0kb upstream 10253 true Chr05: 2412510-2422762 Eucalyptus grandis
Eucgr.E00246 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2421763-2422762 Eucalyptus grandis
Eucgr.E00246 1.0kb downstream 1.0kb downstream 10253 true Chr05: 2411510-2421762 Eucalyptus grandis
Eucgr.E00246 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2411510-2412509 Eucalyptus grandis
Eucgr.E00246 2.0kb upstream 2.0kb upstream 11253 true Chr05: 2412510-2423762 Eucalyptus grandis
Eucgr.E00246 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2421763-2423762 Eucalyptus grandis
Eucgr.E00246 2.0kb downstream 2.0kb downstream 11253 true Chr05: 2410510-2421762 Eucalyptus grandis
Eucgr.E00246 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2410510-2412509 Eucalyptus grandis
Eucgr.E00246 5.0kb upstream 5.0kb upstream 14253 true Chr05: 2412510-2426762 Eucalyptus grandis
Eucgr.E00246 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2421763-2426762 Eucalyptus grandis
Eucgr.E00246 5.0kb downstream 5.0kb downstream 14253 true Chr05: 2407510-2421762 Eucalyptus grandis
Eucgr.E00246 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2407510-2412509 Eucalyptus grandis
Eucgr.E00246 10.0kb upstream 10.0kb upstream 19253 true Chr05: 2412510-2431762 Eucalyptus grandis
Eucgr.E00246 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2421763-2431762 Eucalyptus grandis
Eucgr.E00246 10.0kb downstream 10.0kb downstream 19253 true Chr05: 2402510-2421762 Eucalyptus grandis
Eucgr.E00246 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2402510-2412509 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060556 5270 Rosid View MSA
123746843 5271 Pentapetalae View MSA
122791651 5272 Eudicot View MSA
122051060 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349698 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.41405 0.0 4.80249   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.65572 0.0 5.47487    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.86333 0.0 5.85793    
cufflinks 2.50099 0.0 7.52405   High

0 Strain