Gene : Eucgr.E00260 E. grandis v2.0
Defline:  (1 of 3) PTHR24221:SF138 - LP14331P-RELATED Genomic Order:  235
Name:  ? Eucgr.E00260 Secondary Identifier:  ? PAC:32029636
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00260 0.5kb upstream 0.5kb upstream 7720 true Chr05: 2533003-2540722 Eucalyptus grandis
Eucgr.E00260 0.5kb upstream 0.5kb upstream 500 false Chr05: 2533003-2533502 Eucalyptus grandis
Eucgr.E00260 0.5kb downstream 0.5kb downstream 7720 true Chr05: 2533503-2541222 Eucalyptus grandis
Eucgr.E00260 0.5kb downstream 0.5kb downstream 500 false Chr05: 2540723-2541222 Eucalyptus grandis
Eucgr.E00260 1.0kb upstream 1.0kb upstream 8220 true Chr05: 2532503-2540722 Eucalyptus grandis
Eucgr.E00260 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2532503-2533502 Eucalyptus grandis
Eucgr.E00260 1.0kb downstream 1.0kb downstream 8220 true Chr05: 2533503-2541722 Eucalyptus grandis
Eucgr.E00260 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2540723-2541722 Eucalyptus grandis
Eucgr.E00260 2.0kb upstream 2.0kb upstream 9220 true Chr05: 2531503-2540722 Eucalyptus grandis
Eucgr.E00260 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2531503-2533502 Eucalyptus grandis
Eucgr.E00260 2.0kb downstream 2.0kb downstream 9220 true Chr05: 2533503-2542722 Eucalyptus grandis
Eucgr.E00260 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2540723-2542722 Eucalyptus grandis
Eucgr.E00260 5.0kb upstream 5.0kb upstream 12220 true Chr05: 2528503-2540722 Eucalyptus grandis
Eucgr.E00260 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2528503-2533502 Eucalyptus grandis
Eucgr.E00260 5.0kb downstream 5.0kb downstream 12220 true Chr05: 2533503-2545722 Eucalyptus grandis
Eucgr.E00260 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2540723-2545722 Eucalyptus grandis
Eucgr.E00260 10.0kb upstream 10.0kb upstream 17220 true Chr05: 2523503-2540722 Eucalyptus grandis
Eucgr.E00260 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2523503-2533502 Eucalyptus grandis
Eucgr.E00260 10.0kb downstream 10.0kb downstream 17220 true Chr05: 2533503-2550722 Eucalyptus grandis
Eucgr.E00260 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2540723-2550722 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067084 5270 Rosid View MSA
123740508 5271 Pentapetalae View MSA
122789191 5272 Eudicot View MSA
122051642 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350540 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.8487 0.0 35.1578    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 22.2254 0.0 49.8179   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 15.9757 0.0 35.437    

0 Strain