Gene : Eucgr.E00250 E. grandis v2.0
Defline:  (1 of 1) PF08320 - PIG-X / PBN1 (PIG-X) Genomic Order:  225
Name:  ? Eucgr.E00250 Secondary Identifier:  ? PAC:32028201
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00250 0.5kb upstream 0.5kb upstream 3206 true Chr05: 2480564-2483769 Eucalyptus grandis
Eucgr.E00250 0.5kb upstream 0.5kb upstream 500 false Chr05: 2483270-2483769 Eucalyptus grandis
Eucgr.E00250 0.5kb downstream 0.5kb downstream 3206 true Chr05: 2480064-2483269 Eucalyptus grandis
Eucgr.E00250 0.5kb downstream 0.5kb downstream 500 false Chr05: 2480064-2480563 Eucalyptus grandis
Eucgr.E00250 1.0kb upstream 1.0kb upstream 3706 true Chr05: 2480564-2484269 Eucalyptus grandis
Eucgr.E00250 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2483270-2484269 Eucalyptus grandis
Eucgr.E00250 1.0kb downstream 1.0kb downstream 3706 true Chr05: 2479564-2483269 Eucalyptus grandis
Eucgr.E00250 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2479564-2480563 Eucalyptus grandis
Eucgr.E00250 2.0kb upstream 2.0kb upstream 4706 true Chr05: 2480564-2485269 Eucalyptus grandis
Eucgr.E00250 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2483270-2485269 Eucalyptus grandis
Eucgr.E00250 2.0kb downstream 2.0kb downstream 4706 true Chr05: 2478564-2483269 Eucalyptus grandis
Eucgr.E00250 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2478564-2480563 Eucalyptus grandis
Eucgr.E00250 5.0kb upstream 5.0kb upstream 7706 true Chr05: 2480564-2488269 Eucalyptus grandis
Eucgr.E00250 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2483270-2488269 Eucalyptus grandis
Eucgr.E00250 5.0kb downstream 5.0kb downstream 7706 true Chr05: 2475564-2483269 Eucalyptus grandis
Eucgr.E00250 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2475564-2480563 Eucalyptus grandis
Eucgr.E00250 10.0kb upstream 10.0kb upstream 12706 true Chr05: 2480564-2493269 Eucalyptus grandis
Eucgr.E00250 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2483270-2493269 Eucalyptus grandis
Eucgr.E00250 10.0kb downstream 10.0kb downstream 12706 true Chr05: 2470564-2483269 Eucalyptus grandis
Eucgr.E00250 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2470564-2480563 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068426 5270 Rosid View MSA
123736593 5271 Pentapetalae View MSA
122786629 5272 Eudicot View MSA
122050231 5273 Angiosperm View MSA
121311811 5274 Embryophyte View MSA
123349053 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.17722 0.0 8.41115    
cufflinks 2.11888 0.0 5.82675   Low
cufflinks 4.74435 0.0 12.0927    
cufflinks 4.62088 0.0 11.7813    
cufflinks 2.62721 0.0 7.09504    
cufflinks 4.91928 0.0 12.4797    

0 Strain