Gene : Eucgr.E00228 E. grandis v2.0
Defline:  (1 of 1) PF14829 - Glycerol-3-phosphate acyltransferase N-terminal (GPAT_N) Genomic Order:  206
Name:  ? Eucgr.E00228 Secondary Identifier:  ? PAC:32030660
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY0-1319 Eucalyptus grandis pathologic  
Egrandis PWY4FS-7 Eucalyptus grandis pathologic  
Egrandis PWY-7411 Eucalyptus grandis pathologic  
Egrandis TRIGLSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00228 0.5kb upstream 0.5kb upstream 9569 true Chr05: 2203603-2213171 Eucalyptus grandis
Eucgr.E00228 0.5kb upstream 0.5kb upstream 500 false Chr05: 2212672-2213171 Eucalyptus grandis
Eucgr.E00228 0.5kb downstream 0.5kb downstream 9569 true Chr05: 2203103-2212671 Eucalyptus grandis
Eucgr.E00228 0.5kb downstream 0.5kb downstream 500 false Chr05: 2203103-2203602 Eucalyptus grandis
Eucgr.E00228 1.0kb upstream 1.0kb upstream 10069 true Chr05: 2203603-2213671 Eucalyptus grandis
Eucgr.E00228 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2212672-2213671 Eucalyptus grandis
Eucgr.E00228 1.0kb downstream 1.0kb downstream 10069 true Chr05: 2202603-2212671 Eucalyptus grandis
Eucgr.E00228 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2202603-2203602 Eucalyptus grandis
Eucgr.E00228 2.0kb upstream 2.0kb upstream 11069 true Chr05: 2203603-2214671 Eucalyptus grandis
Eucgr.E00228 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2212672-2214671 Eucalyptus grandis
Eucgr.E00228 2.0kb downstream 2.0kb downstream 11069 true Chr05: 2201603-2212671 Eucalyptus grandis
Eucgr.E00228 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2201603-2203602 Eucalyptus grandis
Eucgr.E00228 5.0kb upstream 5.0kb upstream 14069 true Chr05: 2203603-2217671 Eucalyptus grandis
Eucgr.E00228 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2212672-2217671 Eucalyptus grandis
Eucgr.E00228 5.0kb downstream 5.0kb downstream 14069 true Chr05: 2198603-2212671 Eucalyptus grandis
Eucgr.E00228 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2198603-2203602 Eucalyptus grandis
Eucgr.E00228 10.0kb upstream 10.0kb upstream 19069 true Chr05: 2203603-2222671 Eucalyptus grandis
Eucgr.E00228 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2212672-2222671 Eucalyptus grandis
Eucgr.E00228 10.0kb downstream 10.0kb downstream 19069 true Chr05: 2193603-2212671 Eucalyptus grandis
Eucgr.E00228 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2193603-2203602 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061873 5270 Rosid View MSA
123741043 5271 Pentapetalae View MSA
122789862 5272 Eudicot View MSA
122046647 5273 Angiosperm View MSA
121346869 5274 Embryophyte View MSA
123424445 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.9438 0.0 42.3875    
cufflinks 2.30483 0.0 6.4018    
cufflinks 9.01561 0.0 22.7262    
cufflinks 0.948848 0.0 3.08887   Low
cufflinks 1.061 0.0 3.5431   Low
cufflinks 34.4427 0.0 92.3593 High High

0 Strain