Gene : Eucgr.E00233 E. grandis v2.0
Defline:  (1 of 2) PTHR21087:SF0 - INACTIVE SHIKIMATE KINASE LIKE 2, CHLOROPLASTIC-RELATED Genomic Order:  210
Name:  ? Eucgr.E00233 Secondary Identifier:  ? PAC:32030391
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00233 0.5kb upstream 0.5kb upstream 3948 true Chr05: 2251986-2255933 Eucalyptus grandis
Eucgr.E00233 0.5kb upstream 0.5kb upstream 500 false Chr05: 2255434-2255933 Eucalyptus grandis
Eucgr.E00233 0.5kb downstream 0.5kb downstream 3948 true Chr05: 2251486-2255433 Eucalyptus grandis
Eucgr.E00233 0.5kb downstream 0.5kb downstream 500 false Chr05: 2251486-2251985 Eucalyptus grandis
Eucgr.E00233 1.0kb upstream 1.0kb upstream 4448 true Chr05: 2251986-2256433 Eucalyptus grandis
Eucgr.E00233 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2255434-2256433 Eucalyptus grandis
Eucgr.E00233 1.0kb downstream 1.0kb downstream 4448 true Chr05: 2250986-2255433 Eucalyptus grandis
Eucgr.E00233 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2250986-2251985 Eucalyptus grandis
Eucgr.E00233 2.0kb upstream 2.0kb upstream 5448 true Chr05: 2251986-2257433 Eucalyptus grandis
Eucgr.E00233 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2255434-2257433 Eucalyptus grandis
Eucgr.E00233 2.0kb downstream 2.0kb downstream 5448 true Chr05: 2249986-2255433 Eucalyptus grandis
Eucgr.E00233 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2249986-2251985 Eucalyptus grandis
Eucgr.E00233 5.0kb upstream 5.0kb upstream 8448 true Chr05: 2251986-2260433 Eucalyptus grandis
Eucgr.E00233 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2255434-2260433 Eucalyptus grandis
Eucgr.E00233 5.0kb downstream 5.0kb downstream 8448 true Chr05: 2246986-2255433 Eucalyptus grandis
Eucgr.E00233 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2246986-2251985 Eucalyptus grandis
Eucgr.E00233 10.0kb upstream 10.0kb upstream 13448 true Chr05: 2251986-2265433 Eucalyptus grandis
Eucgr.E00233 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2255434-2265433 Eucalyptus grandis
Eucgr.E00233 10.0kb downstream 10.0kb downstream 13448 true Chr05: 2241986-2255433 Eucalyptus grandis
Eucgr.E00233 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2241986-2251985 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072915 5270 Rosid View MSA
123746382 5271 Pentapetalae View MSA
122790414 5272 Eudicot View MSA
122043641 5273 Angiosperm View MSA
121347570 5274 Embryophyte View MSA
123427676 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.90292 0.0 21.8161    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.54024 0.0 16.5206    
cufflinks 0.625138 0.0 2.03318   Low
cufflinks 1.39939 0.0 4.12825    
cufflinks 15.3302 0.0 35.8213   High

0 Strain