Gene : Eucgr.E00187 E. grandis v2.0
Defline:  (1 of 1) PTHR10491 - DTDP-4-DEHYDRORHAMNOSE REDUCTASE Genomic Order:  171
Name:  ? Eucgr.E00187 Secondary Identifier:  ? PAC:32028724
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ETHYL-PWY Eucalyptus grandis pathologic  
Egrandis PWY-5041 Eucalyptus grandis pathologic  
Egrandis PWY-7270 Eucalyptus grandis pathologic  
Egrandis PWY-7528 Eucalyptus grandis pathologic  
Egrandis SAM-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00187 0.5kb upstream 0.5kb upstream 3894 true Chr05: 1868760-1872653 Eucalyptus grandis
Eucgr.E00187 0.5kb upstream 0.5kb upstream 500 false Chr05: 1872154-1872653 Eucalyptus grandis
Eucgr.E00187 0.5kb downstream 0.5kb downstream 3894 true Chr05: 1868260-1872153 Eucalyptus grandis
Eucgr.E00187 0.5kb downstream 0.5kb downstream 500 false Chr05: 1868260-1868759 Eucalyptus grandis
Eucgr.E00187 1.0kb upstream 1.0kb upstream 4394 true Chr05: 1868760-1873153 Eucalyptus grandis
Eucgr.E00187 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1872154-1873153 Eucalyptus grandis
Eucgr.E00187 1.0kb downstream 1.0kb downstream 4394 true Chr05: 1867760-1872153 Eucalyptus grandis
Eucgr.E00187 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1867760-1868759 Eucalyptus grandis
Eucgr.E00187 2.0kb upstream 2.0kb upstream 5394 true Chr05: 1868760-1874153 Eucalyptus grandis
Eucgr.E00187 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1872154-1874153 Eucalyptus grandis
Eucgr.E00187 2.0kb downstream 2.0kb downstream 5394 true Chr05: 1866760-1872153 Eucalyptus grandis
Eucgr.E00187 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1866760-1868759 Eucalyptus grandis
Eucgr.E00187 5.0kb upstream 5.0kb upstream 8394 true Chr05: 1868760-1877153 Eucalyptus grandis
Eucgr.E00187 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1872154-1877153 Eucalyptus grandis
Eucgr.E00187 5.0kb downstream 5.0kb downstream 8394 true Chr05: 1863760-1872153 Eucalyptus grandis
Eucgr.E00187 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1863760-1868759 Eucalyptus grandis
Eucgr.E00187 10.0kb upstream 10.0kb upstream 13394 true Chr05: 1868760-1882153 Eucalyptus grandis
Eucgr.E00187 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1872154-1882153 Eucalyptus grandis
Eucgr.E00187 10.0kb downstream 10.0kb downstream 13394 true Chr05: 1858760-1872153 Eucalyptus grandis
Eucgr.E00187 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1858760-1868759 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068376 5270 Rosid View MSA
123738972 5271 Pentapetalae View MSA
122787583 5272 Eudicot View MSA
122046148 5273 Angiosperm View MSA
121346812 5274 Embryophyte View MSA
123424817 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.333 0.0 34.2678    
cufflinks 19.6153 0.0 45.3927    
cufflinks 12.8772 0.0 34.9063    
cufflinks 42.7773 0.0 117.433 High  
cufflinks 46.3987 0.0 115.165 High High
cufflinks 3.17385 0.0 9.02169   Low

0 Strain