Gene : Eucgr.E00211 E. grandis v2.0
Defline:  (1 of 1) PTHR14145:SF2 - COP9 SIGNALOSOME COMPLEX SUBUNIT 1 Genomic Order:  189
Name:  ? Eucgr.E00211 Secondary Identifier:  ? PAC:32031439
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00211 0.5kb upstream 0.5kb upstream 4170 true Chr05: 2101017-2105186 Eucalyptus grandis
Eucgr.E00211 0.5kb upstream 0.5kb upstream 500 false Chr05: 2104687-2105186 Eucalyptus grandis
Eucgr.E00211 0.5kb downstream 0.5kb downstream 4170 true Chr05: 2100517-2104686 Eucalyptus grandis
Eucgr.E00211 0.5kb downstream 0.5kb downstream 500 false Chr05: 2100517-2101016 Eucalyptus grandis
Eucgr.E00211 1.0kb upstream 1.0kb upstream 4670 true Chr05: 2101017-2105686 Eucalyptus grandis
Eucgr.E00211 1.0kb upstream 1.0kb upstream 1000 false Chr05: 2104687-2105686 Eucalyptus grandis
Eucgr.E00211 1.0kb downstream 1.0kb downstream 4670 true Chr05: 2100017-2104686 Eucalyptus grandis
Eucgr.E00211 1.0kb downstream 1.0kb downstream 1000 false Chr05: 2100017-2101016 Eucalyptus grandis
Eucgr.E00211 2.0kb upstream 2.0kb upstream 5670 true Chr05: 2101017-2106686 Eucalyptus grandis
Eucgr.E00211 2.0kb upstream 2.0kb upstream 2000 false Chr05: 2104687-2106686 Eucalyptus grandis
Eucgr.E00211 2.0kb downstream 2.0kb downstream 5670 true Chr05: 2099017-2104686 Eucalyptus grandis
Eucgr.E00211 2.0kb downstream 2.0kb downstream 2000 false Chr05: 2099017-2101016 Eucalyptus grandis
Eucgr.E00211 5.0kb upstream 5.0kb upstream 8670 true Chr05: 2101017-2109686 Eucalyptus grandis
Eucgr.E00211 5.0kb upstream 5.0kb upstream 5000 false Chr05: 2104687-2109686 Eucalyptus grandis
Eucgr.E00211 5.0kb downstream 5.0kb downstream 8670 true Chr05: 2096017-2104686 Eucalyptus grandis
Eucgr.E00211 5.0kb downstream 5.0kb downstream 5000 false Chr05: 2096017-2101016 Eucalyptus grandis
Eucgr.E00211 10.0kb upstream 10.0kb upstream 13670 true Chr05: 2101017-2114686 Eucalyptus grandis
Eucgr.E00211 10.0kb upstream 10.0kb upstream 10000 false Chr05: 2104687-2114686 Eucalyptus grandis
Eucgr.E00211 10.0kb downstream 10.0kb downstream 13670 true Chr05: 2091017-2104686 Eucalyptus grandis
Eucgr.E00211 10.0kb downstream 10.0kb downstream 10000 false Chr05: 2091017-2101016 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062748 5270 Rosid View MSA
123740454 5271 Pentapetalae View MSA
122790295 5272 Eudicot View MSA
122047675 5273 Angiosperm View MSA
121344985 5274 Embryophyte View MSA
123424538 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.0861 0.0 64.3277 High  
cufflinks 34.5579 0.0 76.4436   High
cufflinks 24.4137 0.0 54.0876    
cufflinks 31.7626 0.0 70.2421    
cufflinks 21.8392 0.0 48.4722   Low
cufflinks 25.9873 0.0 57.5091    

0 Strain