Gene : Eucgr.E00169 E. grandis v2.0
Defline:  (1 of 2) PF02137 - Adenosine-deaminase (editase) domain (A_deamin) Genomic Order:  154
Name:  ? Eucgr.E00169 Secondary Identifier:  ? PAC:32031856
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00169 0.5kb upstream 0.5kb upstream 5174 true Chr05: 1758177-1763350 Eucalyptus grandis
Eucgr.E00169 0.5kb upstream 0.5kb upstream 500 false Chr05: 1762851-1763350 Eucalyptus grandis
Eucgr.E00169 0.5kb downstream 0.5kb downstream 5174 true Chr05: 1757677-1762850 Eucalyptus grandis
Eucgr.E00169 0.5kb downstream 0.5kb downstream 500 false Chr05: 1757677-1758176 Eucalyptus grandis
Eucgr.E00169 1.0kb upstream 1.0kb upstream 5674 true Chr05: 1758177-1763850 Eucalyptus grandis
Eucgr.E00169 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1762851-1763850 Eucalyptus grandis
Eucgr.E00169 1.0kb downstream 1.0kb downstream 5674 true Chr05: 1757177-1762850 Eucalyptus grandis
Eucgr.E00169 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1757177-1758176 Eucalyptus grandis
Eucgr.E00169 2.0kb upstream 2.0kb upstream 6674 true Chr05: 1758177-1764850 Eucalyptus grandis
Eucgr.E00169 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1762851-1764850 Eucalyptus grandis
Eucgr.E00169 2.0kb downstream 2.0kb downstream 6674 true Chr05: 1756177-1762850 Eucalyptus grandis
Eucgr.E00169 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1756177-1758176 Eucalyptus grandis
Eucgr.E00169 5.0kb upstream 5.0kb upstream 9674 true Chr05: 1758177-1767850 Eucalyptus grandis
Eucgr.E00169 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1762851-1767850 Eucalyptus grandis
Eucgr.E00169 5.0kb downstream 5.0kb downstream 9674 true Chr05: 1753177-1762850 Eucalyptus grandis
Eucgr.E00169 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1753177-1758176 Eucalyptus grandis
Eucgr.E00169 10.0kb upstream 10.0kb upstream 14674 true Chr05: 1758177-1772850 Eucalyptus grandis
Eucgr.E00169 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1762851-1772850 Eucalyptus grandis
Eucgr.E00169 10.0kb downstream 10.0kb downstream 14674 true Chr05: 1748177-1762850 Eucalyptus grandis
Eucgr.E00169 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1748177-1758176 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068273 5270 Rosid View MSA
123741419 5271 Pentapetalae View MSA
122786096 5272 Eudicot View MSA
122043164 5273 Angiosperm View MSA
121346845 5274 Embryophyte View MSA
123424595 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.84223 0.0 6.8834   Low
cufflinks 4.69071 0.0 12.0185    
cufflinks 1.85142 0.0 7.01151   Low
cufflinks 4.19322 0.0 12.5905    
cufflinks 6.65691 0.0 19.8292   High
cufflinks 2.96328 0.0 8.23073    

0 Strain