Gene : Eucgr.E00118 E. grandis v2.0
Defline:  (1 of 1) 4.4.1.9 - L-3-cyanoalanine synthase / Beta-cyanoalanine synthase Genomic Order:  112
Name:  ? Eucgr.E00118 Secondary Identifier:  ? PAC:32029909
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ASPSYNII-PWY Eucalyptus grandis pathologic  
Egrandis CYSTSYN-PWY Eucalyptus grandis pathologic  
Egrandis P401-PWY Eucalyptus grandis pathologic  
Egrandis PWY-6936 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00118 0.5kb upstream 0.5kb upstream 3777 true Chr05: 1057538-1061314 Eucalyptus grandis
Eucgr.E00118 0.5kb upstream 0.5kb upstream 500 false Chr05: 1060815-1061314 Eucalyptus grandis
Eucgr.E00118 0.5kb downstream 0.5kb downstream 3777 true Chr05: 1057038-1060814 Eucalyptus grandis
Eucgr.E00118 0.5kb downstream 0.5kb downstream 500 false Chr05: 1057038-1057537 Eucalyptus grandis
Eucgr.E00118 1.0kb upstream 1.0kb upstream 4277 true Chr05: 1057538-1061814 Eucalyptus grandis
Eucgr.E00118 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1060815-1061814 Eucalyptus grandis
Eucgr.E00118 1.0kb downstream 1.0kb downstream 4277 true Chr05: 1056538-1060814 Eucalyptus grandis
Eucgr.E00118 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1056538-1057537 Eucalyptus grandis
Eucgr.E00118 2.0kb upstream 2.0kb upstream 5277 true Chr05: 1057538-1062814 Eucalyptus grandis
Eucgr.E00118 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1060815-1062814 Eucalyptus grandis
Eucgr.E00118 2.0kb downstream 2.0kb downstream 5277 true Chr05: 1055538-1060814 Eucalyptus grandis
Eucgr.E00118 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1055538-1057537 Eucalyptus grandis
Eucgr.E00118 5.0kb upstream 5.0kb upstream 8277 true Chr05: 1057538-1065814 Eucalyptus grandis
Eucgr.E00118 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1060815-1065814 Eucalyptus grandis
Eucgr.E00118 5.0kb downstream 5.0kb downstream 8277 true Chr05: 1052538-1060814 Eucalyptus grandis
Eucgr.E00118 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1052538-1057537 Eucalyptus grandis
Eucgr.E00118 10.0kb upstream 10.0kb upstream 13277 true Chr05: 1057538-1070814 Eucalyptus grandis
Eucgr.E00118 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1060815-1070814 Eucalyptus grandis
Eucgr.E00118 10.0kb downstream 10.0kb downstream 13277 true Chr05: 1047538-1060814 Eucalyptus grandis
Eucgr.E00118 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1047538-1057537 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040912 5273 Angiosperm View MSA
124062527 5270 Rosid View MSA
123753614 5271 Pentapetalae View MSA
122790357 5272 Eudicot View MSA
121309765 5274 Embryophyte View MSA
123347430 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3498 0.0 33.2434    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.92893 0.0 16.487    
cufflinks 9.85283 0.0 22.7244    
cufflinks 4.25609 0.0 11.2007   Low
cufflinks 13.6673 0.0 36.6304    

0 Strain