Gene : Eucgr.E00112 E. grandis v2.0
Defline:  (1 of 3) PTHR19957:SF129 - SYNTAXIN-71-RELATED Genomic Order:  106
Name:  ? Eucgr.E00112 Secondary Identifier:  ? PAC:32031117
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00112 0.5kb upstream 0.5kb upstream 3755 true Chr05: 1011182-1014936 Eucalyptus grandis
Eucgr.E00112 0.5kb upstream 0.5kb upstream 500 false Chr05: 1014437-1014936 Eucalyptus grandis
Eucgr.E00112 0.5kb downstream 0.5kb downstream 3755 true Chr05: 1010682-1014436 Eucalyptus grandis
Eucgr.E00112 0.5kb downstream 0.5kb downstream 500 false Chr05: 1010682-1011181 Eucalyptus grandis
Eucgr.E00112 1.0kb upstream 1.0kb upstream 4255 true Chr05: 1011182-1015436 Eucalyptus grandis
Eucgr.E00112 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1014437-1015436 Eucalyptus grandis
Eucgr.E00112 1.0kb downstream 1.0kb downstream 4255 true Chr05: 1010182-1014436 Eucalyptus grandis
Eucgr.E00112 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1010182-1011181 Eucalyptus grandis
Eucgr.E00112 2.0kb upstream 2.0kb upstream 5255 true Chr05: 1011182-1016436 Eucalyptus grandis
Eucgr.E00112 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1014437-1016436 Eucalyptus grandis
Eucgr.E00112 2.0kb downstream 2.0kb downstream 5255 true Chr05: 1009182-1014436 Eucalyptus grandis
Eucgr.E00112 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1009182-1011181 Eucalyptus grandis
Eucgr.E00112 5.0kb upstream 5.0kb upstream 8255 true Chr05: 1011182-1019436 Eucalyptus grandis
Eucgr.E00112 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1014437-1019436 Eucalyptus grandis
Eucgr.E00112 5.0kb downstream 5.0kb downstream 8255 true Chr05: 1006182-1014436 Eucalyptus grandis
Eucgr.E00112 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1006182-1011181 Eucalyptus grandis
Eucgr.E00112 10.0kb upstream 10.0kb upstream 13255 true Chr05: 1011182-1024436 Eucalyptus grandis
Eucgr.E00112 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1014437-1024436 Eucalyptus grandis
Eucgr.E00112 10.0kb downstream 10.0kb downstream 13255 true Chr05: 1001182-1014436 Eucalyptus grandis
Eucgr.E00112 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1001182-1011181 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050935 5270 Rosid View MSA
123619943 5271 Pentapetalae View MSA
122796614 5272 Eudicot View MSA
122044212 5273 Angiosperm View MSA
121345851 5274 Embryophyte View MSA
123426500 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9959 0.0 32.5318    
cufflinks 29.009 0.0 64.7354   High
cufflinks 12.3317 0.0 29.0316    
cufflinks 22.8752 0.0 51.5446    
cufflinks 21.1012 0.0 47.7661    
cufflinks 9.78917 0.0 23.4409   Low

0 Strain