Gene : Eucgr.E00082 E. grandis v2.0
Defline:  (1 of 1) PTHR12416:SF2 - RRNA-PROCESSING PROTEIN FCF1 HOMOLOG Genomic Order:  77
Name:  ? Eucgr.E00082 Secondary Identifier:  ? PAC:32030514
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00082 0.5kb upstream 0.5kb upstream 3516 true Chr05: 750583-754098 Eucalyptus grandis
Eucgr.E00082 0.5kb upstream 0.5kb upstream 500 false Chr05: 753599-754098 Eucalyptus grandis
Eucgr.E00082 0.5kb downstream 0.5kb downstream 3516 true Chr05: 750083-753598 Eucalyptus grandis
Eucgr.E00082 0.5kb downstream 0.5kb downstream 500 false Chr05: 750083-750582 Eucalyptus grandis
Eucgr.E00082 1.0kb upstream 1.0kb upstream 4016 true Chr05: 750583-754598 Eucalyptus grandis
Eucgr.E00082 1.0kb upstream 1.0kb upstream 1000 false Chr05: 753599-754598 Eucalyptus grandis
Eucgr.E00082 1.0kb downstream 1.0kb downstream 4016 true Chr05: 749583-753598 Eucalyptus grandis
Eucgr.E00082 1.0kb downstream 1.0kb downstream 1000 false Chr05: 749583-750582 Eucalyptus grandis
Eucgr.E00082 2.0kb upstream 2.0kb upstream 5016 true Chr05: 750583-755598 Eucalyptus grandis
Eucgr.E00082 2.0kb upstream 2.0kb upstream 2000 false Chr05: 753599-755598 Eucalyptus grandis
Eucgr.E00082 2.0kb downstream 2.0kb downstream 5016 true Chr05: 748583-753598 Eucalyptus grandis
Eucgr.E00082 2.0kb downstream 2.0kb downstream 2000 false Chr05: 748583-750582 Eucalyptus grandis
Eucgr.E00082 5.0kb upstream 5.0kb upstream 8016 true Chr05: 750583-758598 Eucalyptus grandis
Eucgr.E00082 5.0kb upstream 5.0kb upstream 5000 false Chr05: 753599-758598 Eucalyptus grandis
Eucgr.E00082 5.0kb downstream 5.0kb downstream 8016 true Chr05: 745583-753598 Eucalyptus grandis
Eucgr.E00082 5.0kb downstream 5.0kb downstream 5000 false Chr05: 745583-750582 Eucalyptus grandis
Eucgr.E00082 10.0kb upstream 10.0kb upstream 13016 true Chr05: 750583-763598 Eucalyptus grandis
Eucgr.E00082 10.0kb upstream 10.0kb upstream 10000 false Chr05: 753599-763598 Eucalyptus grandis
Eucgr.E00082 10.0kb downstream 10.0kb downstream 13016 true Chr05: 740583-753598 Eucalyptus grandis
Eucgr.E00082 10.0kb downstream 10.0kb downstream 10000 false Chr05: 740583-750582 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074295 5270 Rosid View MSA
123738427 5271 Pentapetalae View MSA
122793341 5272 Eudicot View MSA
122042240 5273 Angiosperm View MSA
121350234 5274 Embryophyte View MSA
123426184 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.17551 0.0 19.7512    
cufflinks 6.01903 0.0 14.972    
cufflinks 11.0918 0.0 26.0382   High
cufflinks 11.6503 0.0 27.2099   High
cufflinks 7.45178 0.0 18.1283    
cufflinks 5.66336 0.0 14.2136   Low

0 Strain