Gene : Eucgr.E00063 E. grandis v2.0
Defline:  (1 of 2) PTHR10217:SF527 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 Genomic Order:  58
Name:  ? Eucgr.E00063 Secondary Identifier:  ? PAC:32028809
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00063 0.5kb upstream 0.5kb upstream 4053 true Chr05: 611620-615672 Eucalyptus grandis
Eucgr.E00063 0.5kb upstream 0.5kb upstream 500 false Chr05: 615173-615672 Eucalyptus grandis
Eucgr.E00063 0.5kb downstream 0.5kb downstream 4053 true Chr05: 611120-615172 Eucalyptus grandis
Eucgr.E00063 0.5kb downstream 0.5kb downstream 500 false Chr05: 611120-611619 Eucalyptus grandis
Eucgr.E00063 1.0kb upstream 1.0kb upstream 4553 true Chr05: 611620-616172 Eucalyptus grandis
Eucgr.E00063 1.0kb upstream 1.0kb upstream 1000 false Chr05: 615173-616172 Eucalyptus grandis
Eucgr.E00063 1.0kb downstream 1.0kb downstream 4553 true Chr05: 610620-615172 Eucalyptus grandis
Eucgr.E00063 1.0kb downstream 1.0kb downstream 1000 false Chr05: 610620-611619 Eucalyptus grandis
Eucgr.E00063 2.0kb upstream 2.0kb upstream 5553 true Chr05: 611620-617172 Eucalyptus grandis
Eucgr.E00063 2.0kb upstream 2.0kb upstream 2000 false Chr05: 615173-617172 Eucalyptus grandis
Eucgr.E00063 2.0kb downstream 2.0kb downstream 5553 true Chr05: 609620-615172 Eucalyptus grandis
Eucgr.E00063 2.0kb downstream 2.0kb downstream 2000 false Chr05: 609620-611619 Eucalyptus grandis
Eucgr.E00063 5.0kb upstream 5.0kb upstream 8553 true Chr05: 611620-620172 Eucalyptus grandis
Eucgr.E00063 5.0kb upstream 5.0kb upstream 5000 false Chr05: 615173-620172 Eucalyptus grandis
Eucgr.E00063 5.0kb downstream 5.0kb downstream 8553 true Chr05: 606620-615172 Eucalyptus grandis
Eucgr.E00063 5.0kb downstream 5.0kb downstream 5000 false Chr05: 606620-611619 Eucalyptus grandis
Eucgr.E00063 10.0kb upstream 10.0kb upstream 13553 true Chr05: 611620-625172 Eucalyptus grandis
Eucgr.E00063 10.0kb upstream 10.0kb upstream 10000 false Chr05: 615173-625172 Eucalyptus grandis
Eucgr.E00063 10.0kb downstream 10.0kb downstream 13553 true Chr05: 601620-615172 Eucalyptus grandis
Eucgr.E00063 10.0kb downstream 10.0kb downstream 10000 false Chr05: 601620-611619 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050847 5270 Rosid View MSA
123745876 5271 Pentapetalae View MSA
122785866 5272 Eudicot View MSA
122044448 5273 Angiosperm View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.8826 0.0 33.3419    
cufflinks 0.258221 0.0 1.00368 Low Low
cufflinks 20.7289 0.0 46.4967    
cufflinks 3.20224 0.0 8.06694    
cufflinks 11.123 0.0 25.3979    
cufflinks 36.2447 0.0 91.0392 High  

0 Strain