Gene : Eucgr.E00073 E. grandis v2.0
Defline:  (1 of 5) PTHR22847:SF422 - PROTEIN SUPPRESSOR OF PHYA-105 1 Genomic Order:  68
Name:  ? Eucgr.E00073 Secondary Identifier:  ? PAC:32030245
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00073 0.5kb upstream 0.5kb upstream 5427 true Chr05: 696604-702030 Eucalyptus grandis
Eucgr.E00073 0.5kb upstream 0.5kb upstream 500 false Chr05: 696604-697103 Eucalyptus grandis
Eucgr.E00073 0.5kb downstream 0.5kb downstream 5427 true Chr05: 697104-702530 Eucalyptus grandis
Eucgr.E00073 0.5kb downstream 0.5kb downstream 500 false Chr05: 702031-702530 Eucalyptus grandis
Eucgr.E00073 1.0kb upstream 1.0kb upstream 5927 true Chr05: 696104-702030 Eucalyptus grandis
Eucgr.E00073 1.0kb upstream 1.0kb upstream 1000 false Chr05: 696104-697103 Eucalyptus grandis
Eucgr.E00073 1.0kb downstream 1.0kb downstream 5927 true Chr05: 697104-703030 Eucalyptus grandis
Eucgr.E00073 1.0kb downstream 1.0kb downstream 1000 false Chr05: 702031-703030 Eucalyptus grandis
Eucgr.E00073 2.0kb upstream 2.0kb upstream 6927 true Chr05: 695104-702030 Eucalyptus grandis
Eucgr.E00073 2.0kb upstream 2.0kb upstream 2000 false Chr05: 695104-697103 Eucalyptus grandis
Eucgr.E00073 2.0kb downstream 2.0kb downstream 6927 true Chr05: 697104-704030 Eucalyptus grandis
Eucgr.E00073 2.0kb downstream 2.0kb downstream 2000 false Chr05: 702031-704030 Eucalyptus grandis
Eucgr.E00073 5.0kb upstream 5.0kb upstream 9927 true Chr05: 692104-702030 Eucalyptus grandis
Eucgr.E00073 5.0kb upstream 5.0kb upstream 5000 false Chr05: 692104-697103 Eucalyptus grandis
Eucgr.E00073 5.0kb downstream 5.0kb downstream 9927 true Chr05: 697104-707030 Eucalyptus grandis
Eucgr.E00073 5.0kb downstream 5.0kb downstream 5000 false Chr05: 702031-707030 Eucalyptus grandis
Eucgr.E00073 10.0kb upstream 10.0kb upstream 14927 true Chr05: 687104-702030 Eucalyptus grandis
Eucgr.E00073 10.0kb upstream 10.0kb upstream 10000 false Chr05: 687104-697103 Eucalyptus grandis
Eucgr.E00073 10.0kb downstream 10.0kb downstream 14927 true Chr05: 697104-712030 Eucalyptus grandis
Eucgr.E00073 10.0kb downstream 10.0kb downstream 10000 false Chr05: 702031-712030 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051447 5270 Rosid View MSA
123749693 5271 Pentapetalae View MSA
122793878 5272 Eudicot View MSA
122043681 5273 Angiosperm View MSA
121350599 5274 Embryophyte View MSA
123427986 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.88809 0.0 6.05611    
cufflinks 2.20316 0.0 5.78904    
cufflinks 3.00703 0.0 9.56855    
cufflinks 0.99209 0.0 2.83817    
cufflinks 0.173628 0.0 0.707236 Low Low
cufflinks 8.22071 0.0 19.5639   High

0 Strain