Gene : Eucgr.E00032 E. grandis v2.0
Defline:  (1 of 2) PTHR13943:SF32 - NC DOMAIN-CONTAINING PROTEIN-LIKE PROTEIN Genomic Order:  30
Name:  ? Eucgr.E00032 Secondary Identifier:  ? PAC:32030895
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00032 0.5kb upstream 0.5kb upstream 3641 true Chr05: 351712-355352 Eucalyptus grandis
Eucgr.E00032 0.5kb upstream 0.5kb upstream 500 false Chr05: 351712-352211 Eucalyptus grandis
Eucgr.E00032 0.5kb downstream 0.5kb downstream 3641 true Chr05: 352212-355852 Eucalyptus grandis
Eucgr.E00032 0.5kb downstream 0.5kb downstream 500 false Chr05: 355353-355852 Eucalyptus grandis
Eucgr.E00032 1.0kb upstream 1.0kb upstream 4141 true Chr05: 351212-355352 Eucalyptus grandis
Eucgr.E00032 1.0kb upstream 1.0kb upstream 1000 false Chr05: 351212-352211 Eucalyptus grandis
Eucgr.E00032 1.0kb downstream 1.0kb downstream 4141 true Chr05: 352212-356352 Eucalyptus grandis
Eucgr.E00032 1.0kb downstream 1.0kb downstream 1000 false Chr05: 355353-356352 Eucalyptus grandis
Eucgr.E00032 2.0kb upstream 2.0kb upstream 5141 true Chr05: 350212-355352 Eucalyptus grandis
Eucgr.E00032 2.0kb upstream 2.0kb upstream 2000 false Chr05: 350212-352211 Eucalyptus grandis
Eucgr.E00032 2.0kb downstream 2.0kb downstream 5141 true Chr05: 352212-357352 Eucalyptus grandis
Eucgr.E00032 2.0kb downstream 2.0kb downstream 2000 false Chr05: 355353-357352 Eucalyptus grandis
Eucgr.E00032 5.0kb upstream 5.0kb upstream 8141 true Chr05: 347212-355352 Eucalyptus grandis
Eucgr.E00032 5.0kb upstream 5.0kb upstream 5000 false Chr05: 347212-352211 Eucalyptus grandis
Eucgr.E00032 5.0kb downstream 5.0kb downstream 8141 true Chr05: 352212-360352 Eucalyptus grandis
Eucgr.E00032 5.0kb downstream 5.0kb downstream 5000 false Chr05: 355353-360352 Eucalyptus grandis
Eucgr.E00032 10.0kb upstream 10.0kb upstream 13141 true Chr05: 342212-355352 Eucalyptus grandis
Eucgr.E00032 10.0kb upstream 10.0kb upstream 10000 false Chr05: 342212-352211 Eucalyptus grandis
Eucgr.E00032 10.0kb downstream 10.0kb downstream 13141 true Chr05: 352212-365352 Eucalyptus grandis
Eucgr.E00032 10.0kb downstream 10.0kb downstream 10000 false Chr05: 355353-365352 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060781 5270 Rosid View MSA
123746074 5271 Pentapetalae View MSA
122790931 5272 Eudicot View MSA
122046172 5273 Angiosperm View MSA
121351388 5274 Embryophyte View MSA
123382148 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2556 0.0 28.0921    
cufflinks 25.6502 0.0 57.5787    
cufflinks 10.588 0.0 24.5296    
cufflinks 24.3865 0.0 54.7507    
cufflinks 45.1404 0.0 103.757 High High
cufflinks 5.96194 0.0 14.6243   Low

0 Strain