Gene : Eucgr.E00022 E. grandis v2.0
Defline:  (1 of 1) PTHR24349//PTHR24349:SF103 - SERINE/THREONINE-PROTEIN KINASE Genomic Order:  20
Name:  ? Eucgr.E00022 Secondary Identifier:  ? PAC:32029198
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00022 0.5kb upstream 0.5kb upstream 7946 true Chr05: 268743-276688 Eucalyptus grandis
Eucgr.E00022 0.5kb upstream 0.5kb upstream 500 false Chr05: 268743-269242 Eucalyptus grandis
Eucgr.E00022 0.5kb downstream 0.5kb downstream 7946 true Chr05: 269243-277188 Eucalyptus grandis
Eucgr.E00022 0.5kb downstream 0.5kb downstream 500 false Chr05: 276689-277188 Eucalyptus grandis
Eucgr.E00022 1.0kb upstream 1.0kb upstream 8446 true Chr05: 268243-276688 Eucalyptus grandis
Eucgr.E00022 1.0kb upstream 1.0kb upstream 1000 false Chr05: 268243-269242 Eucalyptus grandis
Eucgr.E00022 1.0kb downstream 1.0kb downstream 8446 true Chr05: 269243-277688 Eucalyptus grandis
Eucgr.E00022 1.0kb downstream 1.0kb downstream 1000 false Chr05: 276689-277688 Eucalyptus grandis
Eucgr.E00022 2.0kb upstream 2.0kb upstream 9446 true Chr05: 267243-276688 Eucalyptus grandis
Eucgr.E00022 2.0kb upstream 2.0kb upstream 2000 false Chr05: 267243-269242 Eucalyptus grandis
Eucgr.E00022 2.0kb downstream 2.0kb downstream 9446 true Chr05: 269243-278688 Eucalyptus grandis
Eucgr.E00022 2.0kb downstream 2.0kb downstream 2000 false Chr05: 276689-278688 Eucalyptus grandis
Eucgr.E00022 5.0kb upstream 5.0kb upstream 12446 true Chr05: 264243-276688 Eucalyptus grandis
Eucgr.E00022 5.0kb upstream 5.0kb upstream 5000 false Chr05: 264243-269242 Eucalyptus grandis
Eucgr.E00022 5.0kb downstream 5.0kb downstream 12446 true Chr05: 269243-281688 Eucalyptus grandis
Eucgr.E00022 5.0kb downstream 5.0kb downstream 5000 false Chr05: 276689-281688 Eucalyptus grandis
Eucgr.E00022 10.0kb upstream 10.0kb upstream 17446 true Chr05: 259243-276688 Eucalyptus grandis
Eucgr.E00022 10.0kb upstream 10.0kb upstream 10000 false Chr05: 259243-269242 Eucalyptus grandis
Eucgr.E00022 10.0kb downstream 10.0kb downstream 17446 true Chr05: 269243-286688 Eucalyptus grandis
Eucgr.E00022 10.0kb downstream 10.0kb downstream 10000 false Chr05: 276689-286688 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062108 5270 Rosid View MSA
123749473 5271 Pentapetalae View MSA
122789222 5272 Eudicot View MSA
122047045 5273 Angiosperm View MSA
121343860 5274 Embryophyte View MSA
123379933 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0918 0.0 24.7499    
cufflinks 14.1508 0.0 31.3557   High
cufflinks 11.1061 0.0 24.7625    
cufflinks 8.566 0.0 19.2689    
cufflinks 7.21651 0.0 16.4469   Low
cufflinks 13.49 0.0 29.9459    

0 Strain