Gene : Eucgr.E00013 E. grandis v2.0
Defline:  (1 of 11) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  11
Name:  ? Eucgr.E00013 Secondary Identifier:  ? PAC:32028937
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00013 0.5kb upstream 0.5kb upstream 5889 true Chr05: 204099-209987 Eucalyptus grandis
Eucgr.E00013 0.5kb upstream 0.5kb upstream 500 false Chr05: 209488-209987 Eucalyptus grandis
Eucgr.E00013 0.5kb downstream 0.5kb downstream 5889 true Chr05: 203599-209487 Eucalyptus grandis
Eucgr.E00013 0.5kb downstream 0.5kb downstream 500 false Chr05: 203599-204098 Eucalyptus grandis
Eucgr.E00013 1.0kb upstream 1.0kb upstream 6389 true Chr05: 204099-210487 Eucalyptus grandis
Eucgr.E00013 1.0kb upstream 1.0kb upstream 1000 false Chr05: 209488-210487 Eucalyptus grandis
Eucgr.E00013 1.0kb downstream 1.0kb downstream 6389 true Chr05: 203099-209487 Eucalyptus grandis
Eucgr.E00013 1.0kb downstream 1.0kb downstream 1000 false Chr05: 203099-204098 Eucalyptus grandis
Eucgr.E00013 2.0kb upstream 2.0kb upstream 7389 true Chr05: 204099-211487 Eucalyptus grandis
Eucgr.E00013 2.0kb upstream 2.0kb upstream 2000 false Chr05: 209488-211487 Eucalyptus grandis
Eucgr.E00013 2.0kb downstream 2.0kb downstream 7389 true Chr05: 202099-209487 Eucalyptus grandis
Eucgr.E00013 2.0kb downstream 2.0kb downstream 2000 false Chr05: 202099-204098 Eucalyptus grandis
Eucgr.E00013 5.0kb upstream 5.0kb upstream 10389 true Chr05: 204099-214487 Eucalyptus grandis
Eucgr.E00013 5.0kb upstream 5.0kb upstream 5000 false Chr05: 209488-214487 Eucalyptus grandis
Eucgr.E00013 5.0kb downstream 5.0kb downstream 10389 true Chr05: 199099-209487 Eucalyptus grandis
Eucgr.E00013 5.0kb downstream 5.0kb downstream 5000 false Chr05: 199099-204098 Eucalyptus grandis
Eucgr.E00013 10.0kb upstream 10.0kb upstream 15389 true Chr05: 204099-219487 Eucalyptus grandis
Eucgr.E00013 10.0kb upstream 10.0kb upstream 10000 false Chr05: 209488-219487 Eucalyptus grandis
Eucgr.E00013 10.0kb downstream 10.0kb downstream 15389 true Chr05: 194099-209487 Eucalyptus grandis
Eucgr.E00013 10.0kb downstream 10.0kb downstream 10000 false Chr05: 194099-204098 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069278 5270 Rosid View MSA
123746031 5271 Pentapetalae View MSA
122794161 5272 Eudicot View MSA
122048441 5273 Angiosperm View MSA
121348258 5274 Embryophyte View MSA
123425771 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0769 0.0 34.8288    
cufflinks 17.6543 0.0 41.8261    
cufflinks 11.618 0.0 27.4075    
cufflinks 5.96431 0.0 15.2932   Low
cufflinks 6.12131 0.0 15.5977   Low
cufflinks 32.8713 0.0 74.0789   High

0 Strain