Gene : Eucgr.L00170 E. grandis v2.0
Defline:  (1 of 3) PF05421 - Protein of unknown function (DUF751) (DUF751) Genomic Order:  943
Name:  ? Eucgr.L00170 Secondary Identifier:  ? PAC:32051347
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00170 0.5kb upstream 0.5kb upstream 1140 true Chr04: 20592097-20593236 Eucalyptus grandis
Eucgr.L00170 0.5kb upstream 0.5kb upstream 500 false Chr04: 20592737-20593236 Eucalyptus grandis
Eucgr.L00170 0.5kb downstream 0.5kb downstream 1140 true Chr04: 20591597-20592736 Eucalyptus grandis
Eucgr.L00170 0.5kb downstream 0.5kb downstream 500 false Chr04: 20591597-20592096 Eucalyptus grandis
Eucgr.L00170 1.0kb upstream 1.0kb upstream 1640 true Chr04: 20592097-20593736 Eucalyptus grandis
Eucgr.L00170 1.0kb upstream 1.0kb upstream 1000 false Chr04: 20592737-20593736 Eucalyptus grandis
Eucgr.L00170 1.0kb downstream 1.0kb downstream 1640 true Chr04: 20591097-20592736 Eucalyptus grandis
Eucgr.L00170 1.0kb downstream 1.0kb downstream 1000 false Chr04: 20591097-20592096 Eucalyptus grandis
Eucgr.L00170 2.0kb upstream 2.0kb upstream 2640 true Chr04: 20592097-20594736 Eucalyptus grandis
Eucgr.L00170 2.0kb upstream 2.0kb upstream 2000 false Chr04: 20592737-20594736 Eucalyptus grandis
Eucgr.L00170 2.0kb downstream 2.0kb downstream 2640 true Chr04: 20590097-20592736 Eucalyptus grandis
Eucgr.L00170 2.0kb downstream 2.0kb downstream 2000 false Chr04: 20590097-20592096 Eucalyptus grandis
Eucgr.L00170 5.0kb upstream 5.0kb upstream 5640 true Chr04: 20592097-20597736 Eucalyptus grandis
Eucgr.L00170 5.0kb upstream 5.0kb upstream 5000 false Chr04: 20592737-20597736 Eucalyptus grandis
Eucgr.L00170 5.0kb downstream 5.0kb downstream 5640 true Chr04: 20587097-20592736 Eucalyptus grandis
Eucgr.L00170 5.0kb downstream 5.0kb downstream 5000 false Chr04: 20587097-20592096 Eucalyptus grandis
Eucgr.L00170 10.0kb upstream 10.0kb upstream 10640 true Chr04: 20592097-20602736 Eucalyptus grandis
Eucgr.L00170 10.0kb upstream 10.0kb upstream 10000 false Chr04: 20592737-20602736 Eucalyptus grandis
Eucgr.L00170 10.0kb downstream 10.0kb downstream 10640 true Chr04: 20582097-20592736 Eucalyptus grandis
Eucgr.L00170 10.0kb downstream 10.0kb downstream 10000 false Chr04: 20582097-20592096 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073134 5270 Rosid View MSA
123741147 5271 Pentapetalae View MSA
122794953 5272 Eudicot View MSA
122045561 5273 Angiosperm View MSA
121348073 5274 Embryophyte View MSA
123380720 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.829065 0.0 2.8722    
cufflinks 0.356631 0.0 1.38237 Low  
cufflinks 0.466593 0.0 1.7517    
cufflinks 0.903834 0.0 3.10705    
cufflinks 3.67717 0.0 10.5425    
cufflinks 13.9884 0.0 35.3985   High

0 Strain