Gene : Eucgr.E00781 E. grandis v2.0
Defline:  (1 of 2) PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11-2 Genomic Order:  659
Name:  ? Eucgr.E00781 Secondary Identifier:  ? PAC:32030748
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00781 0.5kb upstream 0.5kb upstream 3638 true Chr05: 8125331-8128968 Eucalyptus grandis
Eucgr.E00781 0.5kb upstream 0.5kb upstream 500 false Chr05: 8128469-8128968 Eucalyptus grandis
Eucgr.E00781 0.5kb downstream 0.5kb downstream 3638 true Chr05: 8124831-8128468 Eucalyptus grandis
Eucgr.E00781 0.5kb downstream 0.5kb downstream 500 false Chr05: 8124831-8125330 Eucalyptus grandis
Eucgr.E00781 1.0kb upstream 1.0kb upstream 4138 true Chr05: 8125331-8129468 Eucalyptus grandis
Eucgr.E00781 1.0kb upstream 1.0kb upstream 1000 false Chr05: 8128469-8129468 Eucalyptus grandis
Eucgr.E00781 1.0kb downstream 1.0kb downstream 4138 true Chr05: 8124331-8128468 Eucalyptus grandis
Eucgr.E00781 1.0kb downstream 1.0kb downstream 1000 false Chr05: 8124331-8125330 Eucalyptus grandis
Eucgr.E00781 2.0kb upstream 2.0kb upstream 5138 true Chr05: 8125331-8130468 Eucalyptus grandis
Eucgr.E00781 2.0kb upstream 2.0kb upstream 2000 false Chr05: 8128469-8130468 Eucalyptus grandis
Eucgr.E00781 2.0kb downstream 2.0kb downstream 5138 true Chr05: 8123331-8128468 Eucalyptus grandis
Eucgr.E00781 2.0kb downstream 2.0kb downstream 2000 false Chr05: 8123331-8125330 Eucalyptus grandis
Eucgr.E00781 5.0kb upstream 5.0kb upstream 8138 true Chr05: 8125331-8133468 Eucalyptus grandis
Eucgr.E00781 5.0kb upstream 5.0kb upstream 5000 false Chr05: 8128469-8133468 Eucalyptus grandis
Eucgr.E00781 5.0kb downstream 5.0kb downstream 8138 true Chr05: 8120331-8128468 Eucalyptus grandis
Eucgr.E00781 5.0kb downstream 5.0kb downstream 5000 false Chr05: 8120331-8125330 Eucalyptus grandis
Eucgr.E00781 10.0kb upstream 10.0kb upstream 13138 true Chr05: 8125331-8138468 Eucalyptus grandis
Eucgr.E00781 10.0kb upstream 10.0kb upstream 10000 false Chr05: 8128469-8138468 Eucalyptus grandis
Eucgr.E00781 10.0kb downstream 10.0kb downstream 13138 true Chr05: 8115331-8128468 Eucalyptus grandis
Eucgr.E00781 10.0kb downstream 10.0kb downstream 10000 false Chr05: 8115331-8125330 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065499 5270 Rosid View MSA
123749374 5271 Pentapetalae View MSA
122793256 5272 Eudicot View MSA
122044830 5273 Angiosperm View MSA
121350394 5274 Embryophyte View MSA
123427912 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.171145 0.0 0.644827 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain