Gene : Eucgr.E00785 E. grandis v2.0
Defline:  (1 of 1) PTHR11972:SF69 - RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN F-RELATED Genomic Order:  663
Name:  ? Eucgr.E00785 Secondary Identifier:  ? PAC:32029224
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00785 0.5kb upstream 0.5kb upstream 9560 true Chr05: 8179872-8189431 Eucalyptus grandis
Eucgr.E00785 0.5kb upstream 0.5kb upstream 500 false Chr05: 8179872-8180371 Eucalyptus grandis
Eucgr.E00785 0.5kb downstream 0.5kb downstream 9560 true Chr05: 8180372-8189931 Eucalyptus grandis
Eucgr.E00785 0.5kb downstream 0.5kb downstream 500 false Chr05: 8189432-8189931 Eucalyptus grandis
Eucgr.E00785 1.0kb upstream 1.0kb upstream 10060 true Chr05: 8179372-8189431 Eucalyptus grandis
Eucgr.E00785 1.0kb upstream 1.0kb upstream 1000 false Chr05: 8179372-8180371 Eucalyptus grandis
Eucgr.E00785 1.0kb downstream 1.0kb downstream 10060 true Chr05: 8180372-8190431 Eucalyptus grandis
Eucgr.E00785 1.0kb downstream 1.0kb downstream 1000 false Chr05: 8189432-8190431 Eucalyptus grandis
Eucgr.E00785 2.0kb upstream 2.0kb upstream 11060 true Chr05: 8178372-8189431 Eucalyptus grandis
Eucgr.E00785 2.0kb upstream 2.0kb upstream 2000 false Chr05: 8178372-8180371 Eucalyptus grandis
Eucgr.E00785 2.0kb downstream 2.0kb downstream 11060 true Chr05: 8180372-8191431 Eucalyptus grandis
Eucgr.E00785 2.0kb downstream 2.0kb downstream 2000 false Chr05: 8189432-8191431 Eucalyptus grandis
Eucgr.E00785 5.0kb upstream 5.0kb upstream 14060 true Chr05: 8175372-8189431 Eucalyptus grandis
Eucgr.E00785 5.0kb upstream 5.0kb upstream 5000 false Chr05: 8175372-8180371 Eucalyptus grandis
Eucgr.E00785 5.0kb downstream 5.0kb downstream 14060 true Chr05: 8180372-8194431 Eucalyptus grandis
Eucgr.E00785 5.0kb downstream 5.0kb downstream 5000 false Chr05: 8189432-8194431 Eucalyptus grandis
Eucgr.E00785 10.0kb upstream 10.0kb upstream 19060 true Chr05: 8170372-8189431 Eucalyptus grandis
Eucgr.E00785 10.0kb upstream 10.0kb upstream 10000 false Chr05: 8170372-8180371 Eucalyptus grandis
Eucgr.E00785 10.0kb downstream 10.0kb downstream 19060 true Chr05: 8180372-8199431 Eucalyptus grandis
Eucgr.E00785 10.0kb downstream 10.0kb downstream 10000 false Chr05: 8189432-8199431 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068511 5270 Rosid View MSA
123750784 5271 Pentapetalae View MSA
122788657 5272 Eudicot View MSA
122049816 5273 Angiosperm View MSA
121350202 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.46595 0.0 10.2652    
cufflinks 42.2396 0.0 97.2509 High High
cufflinks 7.88978 0.0 18.0793    
cufflinks 15.1671 0.0 34.3267    
cufflinks 2.86592 0.0 6.85146    
cufflinks 3.20547 0.0 7.55666    

0 Strain