Gene : Eucgr.E00717 E. grandis v2.0
Defline:  (1 of 4) PTHR11652//PTHR11652:SF17 - 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER Genomic Order:  620
Name:  ? Eucgr.E00717 Secondary Identifier:  ? PAC:32030879
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00717 0.5kb upstream 0.5kb upstream 950 true Chr05: 7228268-7229217 Eucalyptus grandis
Eucgr.E00717 0.5kb upstream 0.5kb upstream 500 false Chr05: 7228268-7228767 Eucalyptus grandis
Eucgr.E00717 0.5kb downstream 0.5kb downstream 950 true Chr05: 7228768-7229717 Eucalyptus grandis
Eucgr.E00717 0.5kb downstream 0.5kb downstream 500 false Chr05: 7229218-7229717 Eucalyptus grandis
Eucgr.E00717 1.0kb upstream 1.0kb upstream 1450 true Chr05: 7227768-7229217 Eucalyptus grandis
Eucgr.E00717 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7227768-7228767 Eucalyptus grandis
Eucgr.E00717 1.0kb downstream 1.0kb downstream 1450 true Chr05: 7228768-7230217 Eucalyptus grandis
Eucgr.E00717 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7229218-7230217 Eucalyptus grandis
Eucgr.E00717 2.0kb upstream 2.0kb upstream 2450 true Chr05: 7226768-7229217 Eucalyptus grandis
Eucgr.E00717 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7226768-7228767 Eucalyptus grandis
Eucgr.E00717 2.0kb downstream 2.0kb downstream 2450 true Chr05: 7228768-7231217 Eucalyptus grandis
Eucgr.E00717 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7229218-7231217 Eucalyptus grandis
Eucgr.E00717 5.0kb upstream 5.0kb upstream 5450 true Chr05: 7223768-7229217 Eucalyptus grandis
Eucgr.E00717 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7223768-7228767 Eucalyptus grandis
Eucgr.E00717 5.0kb downstream 5.0kb downstream 5450 true Chr05: 7228768-7234217 Eucalyptus grandis
Eucgr.E00717 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7229218-7234217 Eucalyptus grandis
Eucgr.E00717 10.0kb upstream 10.0kb upstream 10450 true Chr05: 7218768-7229217 Eucalyptus grandis
Eucgr.E00717 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7218768-7228767 Eucalyptus grandis
Eucgr.E00717 10.0kb downstream 10.0kb downstream 10450 true Chr05: 7228768-7239217 Eucalyptus grandis
Eucgr.E00717 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7229218-7239217 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063732 5270 Rosid View MSA
123750891 5271 Pentapetalae View MSA
122796702 5272 Eudicot View MSA
122044358 5273 Angiosperm View MSA
123429171 5275 Viridiplantae View MSA
121351184 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1204 0.0 37.56    
cufflinks 21.6706 0.0 54.7854    
cufflinks 10.5915 0.0 29.1004   Low
cufflinks 13.5041 0.0 36.139    
cufflinks 12.7326 0.0 34.0661    
cufflinks 28.0211 0.0 70.4904   High

0 Strain