Gene : Eucgr.E00627 E. grandis v2.0
Defline:  (1 of 1) PTHR21726:SF38 - PROTEIN TRM32 Genomic Order:  545
Name:  ? Eucgr.E00627 Secondary Identifier:  ? PAC:32030749
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00627 0.5kb upstream 0.5kb upstream 3197 true Chr05: 6010638-6013834 Eucalyptus grandis
Eucgr.E00627 0.5kb upstream 0.5kb upstream 500 false Chr05: 6013335-6013834 Eucalyptus grandis
Eucgr.E00627 0.5kb downstream 0.5kb downstream 3197 true Chr05: 6010138-6013334 Eucalyptus grandis
Eucgr.E00627 0.5kb downstream 0.5kb downstream 500 false Chr05: 6010138-6010637 Eucalyptus grandis
Eucgr.E00627 1.0kb upstream 1.0kb upstream 3697 true Chr05: 6010638-6014334 Eucalyptus grandis
Eucgr.E00627 1.0kb upstream 1.0kb upstream 1000 false Chr05: 6013335-6014334 Eucalyptus grandis
Eucgr.E00627 1.0kb downstream 1.0kb downstream 3697 true Chr05: 6009638-6013334 Eucalyptus grandis
Eucgr.E00627 1.0kb downstream 1.0kb downstream 1000 false Chr05: 6009638-6010637 Eucalyptus grandis
Eucgr.E00627 2.0kb upstream 2.0kb upstream 4697 true Chr05: 6010638-6015334 Eucalyptus grandis
Eucgr.E00627 2.0kb upstream 2.0kb upstream 2000 false Chr05: 6013335-6015334 Eucalyptus grandis
Eucgr.E00627 2.0kb downstream 2.0kb downstream 4697 true Chr05: 6008638-6013334 Eucalyptus grandis
Eucgr.E00627 2.0kb downstream 2.0kb downstream 2000 false Chr05: 6008638-6010637 Eucalyptus grandis
Eucgr.E00627 5.0kb upstream 5.0kb upstream 7697 true Chr05: 6010638-6018334 Eucalyptus grandis
Eucgr.E00627 5.0kb upstream 5.0kb upstream 5000 false Chr05: 6013335-6018334 Eucalyptus grandis
Eucgr.E00627 5.0kb downstream 5.0kb downstream 7697 true Chr05: 6005638-6013334 Eucalyptus grandis
Eucgr.E00627 5.0kb downstream 5.0kb downstream 5000 false Chr05: 6005638-6010637 Eucalyptus grandis
Eucgr.E00627 10.0kb upstream 10.0kb upstream 12697 true Chr05: 6010638-6023334 Eucalyptus grandis
Eucgr.E00627 10.0kb upstream 10.0kb upstream 10000 false Chr05: 6013335-6023334 Eucalyptus grandis
Eucgr.E00627 10.0kb downstream 10.0kb downstream 12697 true Chr05: 6000638-6013334 Eucalyptus grandis
Eucgr.E00627 10.0kb downstream 10.0kb downstream 10000 false Chr05: 6000638-6010637 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071904 5270 Rosid View MSA
123753280 5271 Pentapetalae View MSA
122795143 5272 Eudicot View MSA
122044494 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.23257 0.0 3.32153    
cufflinks 3.50037 0.0 8.44058   High
cufflinks 0.420616 0.0 1.2626   Low
cufflinks 2.40546 0.0 6.01258    
cufflinks 1.63243 0.0 4.25854    
cufflinks 0.540951 0.0 1.59937 Low Low

0 Strain