Gene : Eucgr.E00596 E. grandis v2.0
Defline:  (1 of 6) PF12043 - Domain of unknown function (DUF3527) (DUF3527) Genomic Order:  527
Name:  ? Eucgr.E00596 Secondary Identifier:  ? PAC:32028514
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00596 0.5kb upstream 0.5kb upstream 4931 true Chr05: 5706778-5711708 Eucalyptus grandis
Eucgr.E00596 0.5kb upstream 0.5kb upstream 500 false Chr05: 5706778-5707277 Eucalyptus grandis
Eucgr.E00596 0.5kb downstream 0.5kb downstream 4931 true Chr05: 5707278-5712208 Eucalyptus grandis
Eucgr.E00596 0.5kb downstream 0.5kb downstream 500 false Chr05: 5711709-5712208 Eucalyptus grandis
Eucgr.E00596 1.0kb upstream 1.0kb upstream 5431 true Chr05: 5706278-5711708 Eucalyptus grandis
Eucgr.E00596 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5706278-5707277 Eucalyptus grandis
Eucgr.E00596 1.0kb downstream 1.0kb downstream 5431 true Chr05: 5707278-5712708 Eucalyptus grandis
Eucgr.E00596 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5711709-5712708 Eucalyptus grandis
Eucgr.E00596 2.0kb upstream 2.0kb upstream 6431 true Chr05: 5705278-5711708 Eucalyptus grandis
Eucgr.E00596 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5705278-5707277 Eucalyptus grandis
Eucgr.E00596 2.0kb downstream 2.0kb downstream 6431 true Chr05: 5707278-5713708 Eucalyptus grandis
Eucgr.E00596 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5711709-5713708 Eucalyptus grandis
Eucgr.E00596 5.0kb upstream 5.0kb upstream 9431 true Chr05: 5702278-5711708 Eucalyptus grandis
Eucgr.E00596 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5702278-5707277 Eucalyptus grandis
Eucgr.E00596 5.0kb downstream 5.0kb downstream 9431 true Chr05: 5707278-5716708 Eucalyptus grandis
Eucgr.E00596 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5711709-5716708 Eucalyptus grandis
Eucgr.E00596 10.0kb upstream 10.0kb upstream 14431 true Chr05: 5697278-5711708 Eucalyptus grandis
Eucgr.E00596 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5697278-5707277 Eucalyptus grandis
Eucgr.E00596 10.0kb downstream 10.0kb downstream 14431 true Chr05: 5707278-5721708 Eucalyptus grandis
Eucgr.E00596 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5711709-5721708 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065167 5270 Rosid View MSA
123751410 5271 Pentapetalae View MSA
122793362 5272 Eudicot View MSA
122047262 5273 Angiosperm View MSA
121310717 5274 Embryophyte View MSA
123348134 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.23304 0.0 3.23126    
cufflinks 5.47512 0.0 12.4382   High
cufflinks 0.633622 0.0 1.76465    
cufflinks 5.66033 0.0 12.8107   High
cufflinks 0.61411 0.0 1.71543 Low  
cufflinks 1.21305 0.0 3.20283    

0 Strain