Gene : Eucgr.E00535 E. grandis v2.0
Defline:  (1 of 2) PTHR23322:SF3 - PROTEIN SAY1 Genomic Order:  480
Name:  ? Eucgr.E00535 Secondary Identifier:  ? PAC:32030428
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00535 0.5kb upstream 0.5kb upstream 6163 true Chr05: 5073304-5079466 Eucalyptus grandis
Eucgr.E00535 0.5kb upstream 0.5kb upstream 500 false Chr05: 5078967-5079466 Eucalyptus grandis
Eucgr.E00535 0.5kb downstream 0.5kb downstream 6163 true Chr05: 5072804-5078966 Eucalyptus grandis
Eucgr.E00535 0.5kb downstream 0.5kb downstream 500 false Chr05: 5072804-5073303 Eucalyptus grandis
Eucgr.E00535 1.0kb upstream 1.0kb upstream 6663 true Chr05: 5073304-5079966 Eucalyptus grandis
Eucgr.E00535 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5078967-5079966 Eucalyptus grandis
Eucgr.E00535 1.0kb downstream 1.0kb downstream 6663 true Chr05: 5072304-5078966 Eucalyptus grandis
Eucgr.E00535 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5072304-5073303 Eucalyptus grandis
Eucgr.E00535 2.0kb upstream 2.0kb upstream 7663 true Chr05: 5073304-5080966 Eucalyptus grandis
Eucgr.E00535 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5078967-5080966 Eucalyptus grandis
Eucgr.E00535 2.0kb downstream 2.0kb downstream 7663 true Chr05: 5071304-5078966 Eucalyptus grandis
Eucgr.E00535 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5071304-5073303 Eucalyptus grandis
Eucgr.E00535 5.0kb upstream 5.0kb upstream 10663 true Chr05: 5073304-5083966 Eucalyptus grandis
Eucgr.E00535 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5078967-5083966 Eucalyptus grandis
Eucgr.E00535 5.0kb downstream 5.0kb downstream 10663 true Chr05: 5068304-5078966 Eucalyptus grandis
Eucgr.E00535 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5068304-5073303 Eucalyptus grandis
Eucgr.E00535 10.0kb upstream 10.0kb upstream 15663 true Chr05: 5073304-5088966 Eucalyptus grandis
Eucgr.E00535 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5078967-5088966 Eucalyptus grandis
Eucgr.E00535 10.0kb downstream 10.0kb downstream 15663 true Chr05: 5063304-5078966 Eucalyptus grandis
Eucgr.E00535 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5063304-5073303 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064254 5270 Rosid View MSA
123737041 5271 Pentapetalae View MSA
122785711 5272 Eudicot View MSA
122043295 5273 Angiosperm View MSA
121350840 5274 Embryophyte View MSA
123428055 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.8435 0.0 54.9782    
cufflinks 26.5527 0.0 58.8128    
cufflinks 23.5289 0.0 52.0506   Low
cufflinks 31.676 0.0 70.4306   High
cufflinks 29.4037 0.0 65.2444    
cufflinks 32.0516 0.0 71.2097   High

0 Strain