Gene : Eucgr.E00505 E. grandis v2.0
Defline:  (1 of 1) PTHR10003:SF27 - COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE Genomic Order:  453
Name:  ? Eucgr.E00505 Secondary Identifier:  ? PAC:32031014
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00505 0.5kb upstream 0.5kb upstream 4131 true Chr05: 4720831-4724961 Eucalyptus grandis
Eucgr.E00505 0.5kb upstream 0.5kb upstream 500 false Chr05: 4724462-4724961 Eucalyptus grandis
Eucgr.E00505 0.5kb downstream 0.5kb downstream 4131 true Chr05: 4720331-4724461 Eucalyptus grandis
Eucgr.E00505 0.5kb downstream 0.5kb downstream 500 false Chr05: 4720331-4720830 Eucalyptus grandis
Eucgr.E00505 1.0kb upstream 1.0kb upstream 4631 true Chr05: 4720831-4725461 Eucalyptus grandis
Eucgr.E00505 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4724462-4725461 Eucalyptus grandis
Eucgr.E00505 1.0kb downstream 1.0kb downstream 4631 true Chr05: 4719831-4724461 Eucalyptus grandis
Eucgr.E00505 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4719831-4720830 Eucalyptus grandis
Eucgr.E00505 2.0kb upstream 2.0kb upstream 5631 true Chr05: 4720831-4726461 Eucalyptus grandis
Eucgr.E00505 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4724462-4726461 Eucalyptus grandis
Eucgr.E00505 2.0kb downstream 2.0kb downstream 5631 true Chr05: 4718831-4724461 Eucalyptus grandis
Eucgr.E00505 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4718831-4720830 Eucalyptus grandis
Eucgr.E00505 5.0kb upstream 5.0kb upstream 8631 true Chr05: 4720831-4729461 Eucalyptus grandis
Eucgr.E00505 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4724462-4729461 Eucalyptus grandis
Eucgr.E00505 5.0kb downstream 5.0kb downstream 8631 true Chr05: 4715831-4724461 Eucalyptus grandis
Eucgr.E00505 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4715831-4720830 Eucalyptus grandis
Eucgr.E00505 10.0kb upstream 10.0kb upstream 13631 true Chr05: 4720831-4734461 Eucalyptus grandis
Eucgr.E00505 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4724462-4734461 Eucalyptus grandis
Eucgr.E00505 10.0kb downstream 10.0kb downstream 13631 true Chr05: 4710831-4724461 Eucalyptus grandis
Eucgr.E00505 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4710831-4720830 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062271 5270 Rosid View MSA
123739046 5271 Pentapetalae View MSA
122793199 5272 Eudicot View MSA
122046170 5273 Angiosperm View MSA
121346754 5274 Embryophyte View MSA
123425336 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.9972 0.0 85.2172 High High
cufflinks 28.3415 0.0 63.7887    
cufflinks 36.2081 0.0 90.7711 High  
cufflinks 26.2149 0.0 58.9479   Low
cufflinks 33.0728 0.0 74.1406    
cufflinks 33.4595 0.0 82.9352    

0 Strain