Gene : Eucgr.E00481 E. grandis v2.0
Defline:  (1 of 3) PTHR12290:SF18 - PROTEIN CORNICHON HOMOLOG 3-RELATED Genomic Order:  433
Name:  ? Eucgr.E00481 Secondary Identifier:  ? PAC:32031285
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00481 0.5kb upstream 0.5kb upstream 3220 true Chr05: 4539195-4542414 Eucalyptus grandis
Eucgr.E00481 0.5kb upstream 0.5kb upstream 500 false Chr05: 4539195-4539694 Eucalyptus grandis
Eucgr.E00481 0.5kb downstream 0.5kb downstream 3220 true Chr05: 4539695-4542914 Eucalyptus grandis
Eucgr.E00481 0.5kb downstream 0.5kb downstream 500 false Chr05: 4542415-4542914 Eucalyptus grandis
Eucgr.E00481 1.0kb upstream 1.0kb upstream 3720 true Chr05: 4538695-4542414 Eucalyptus grandis
Eucgr.E00481 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4538695-4539694 Eucalyptus grandis
Eucgr.E00481 1.0kb downstream 1.0kb downstream 3720 true Chr05: 4539695-4543414 Eucalyptus grandis
Eucgr.E00481 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4542415-4543414 Eucalyptus grandis
Eucgr.E00481 2.0kb upstream 2.0kb upstream 4720 true Chr05: 4537695-4542414 Eucalyptus grandis
Eucgr.E00481 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4537695-4539694 Eucalyptus grandis
Eucgr.E00481 2.0kb downstream 2.0kb downstream 4720 true Chr05: 4539695-4544414 Eucalyptus grandis
Eucgr.E00481 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4542415-4544414 Eucalyptus grandis
Eucgr.E00481 5.0kb upstream 5.0kb upstream 7720 true Chr05: 4534695-4542414 Eucalyptus grandis
Eucgr.E00481 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4534695-4539694 Eucalyptus grandis
Eucgr.E00481 5.0kb downstream 5.0kb downstream 7720 true Chr05: 4539695-4547414 Eucalyptus grandis
Eucgr.E00481 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4542415-4547414 Eucalyptus grandis
Eucgr.E00481 10.0kb upstream 10.0kb upstream 12720 true Chr05: 4529695-4542414 Eucalyptus grandis
Eucgr.E00481 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4529695-4539694 Eucalyptus grandis
Eucgr.E00481 10.0kb downstream 10.0kb downstream 12720 true Chr05: 4539695-4552414 Eucalyptus grandis
Eucgr.E00481 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4542415-4552414 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050948 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2021 0.0 35.3969    
cufflinks 2.42216 0.0 7.1678   Low
cufflinks 9.20554 0.0 23.8944    
cufflinks 3.47426 0.0 9.91999   Low
cufflinks 10.6259 0.0 27.2257    
cufflinks 13.5174 0.0 33.9253    

0 Strain