Gene : Eucgr.E00435 E. grandis v2.0
Defline:  (1 of 3) PF04073 - Aminoacyl-tRNA editing domain (tRNA_edit) Genomic Order:  392
Name:  ? Eucgr.E00435 Secondary Identifier:  ? PAC:32030071
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00435 0.5kb upstream 0.5kb upstream 7246 true Chr05: 4149054-4156299 Eucalyptus grandis
Eucgr.E00435 0.5kb upstream 0.5kb upstream 500 false Chr05: 4155800-4156299 Eucalyptus grandis
Eucgr.E00435 0.5kb downstream 0.5kb downstream 7246 true Chr05: 4148554-4155799 Eucalyptus grandis
Eucgr.E00435 0.5kb downstream 0.5kb downstream 500 false Chr05: 4148554-4149053 Eucalyptus grandis
Eucgr.E00435 1.0kb upstream 1.0kb upstream 7746 true Chr05: 4149054-4156799 Eucalyptus grandis
Eucgr.E00435 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4155800-4156799 Eucalyptus grandis
Eucgr.E00435 1.0kb downstream 1.0kb downstream 7746 true Chr05: 4148054-4155799 Eucalyptus grandis
Eucgr.E00435 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4148054-4149053 Eucalyptus grandis
Eucgr.E00435 2.0kb upstream 2.0kb upstream 8746 true Chr05: 4149054-4157799 Eucalyptus grandis
Eucgr.E00435 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4155800-4157799 Eucalyptus grandis
Eucgr.E00435 2.0kb downstream 2.0kb downstream 8746 true Chr05: 4147054-4155799 Eucalyptus grandis
Eucgr.E00435 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4147054-4149053 Eucalyptus grandis
Eucgr.E00435 5.0kb upstream 5.0kb upstream 11746 true Chr05: 4149054-4160799 Eucalyptus grandis
Eucgr.E00435 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4155800-4160799 Eucalyptus grandis
Eucgr.E00435 5.0kb downstream 5.0kb downstream 11746 true Chr05: 4144054-4155799 Eucalyptus grandis
Eucgr.E00435 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4144054-4149053 Eucalyptus grandis
Eucgr.E00435 10.0kb upstream 10.0kb upstream 16746 true Chr05: 4149054-4165799 Eucalyptus grandis
Eucgr.E00435 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4155800-4165799 Eucalyptus grandis
Eucgr.E00435 10.0kb downstream 10.0kb downstream 16746 true Chr05: 4139054-4155799 Eucalyptus grandis
Eucgr.E00435 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4139054-4149053 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069035 5270 Rosid View MSA
123740763 5271 Pentapetalae View MSA
122788934 5272 Eudicot View MSA
122045827 5273 Angiosperm View MSA
121345961 5274 Embryophyte View MSA
123425466 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.97865 0.0 19.547    
cufflinks 11.5925 0.0 34.7625    
cufflinks 10.1315 0.0 51.518    
cufflinks 5.91056 0.0 23.4035    
cufflinks 21.2769 0.0 65.5601   High
cufflinks 5.39329 0.0 19.926   Low

0 Strain