Gene : Eucgr.E00377 E. grandis v2.0
Defline:  (1 of 152) PF00847 - AP2 domain (AP2) Genomic Order:  342
Name:  ? Eucgr.E00377 Secondary Identifier:  ? PAC:32031863
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00377 0.5kb upstream 0.5kb upstream 1796 true Chr05: 3561349-3563144 Eucalyptus grandis
Eucgr.E00377 0.5kb upstream 0.5kb upstream 500 false Chr05: 3561349-3561848 Eucalyptus grandis
Eucgr.E00377 0.5kb downstream 0.5kb downstream 1796 true Chr05: 3561849-3563644 Eucalyptus grandis
Eucgr.E00377 0.5kb downstream 0.5kb downstream 500 false Chr05: 3563145-3563644 Eucalyptus grandis
Eucgr.E00377 1.0kb upstream 1.0kb upstream 2296 true Chr05: 3560849-3563144 Eucalyptus grandis
Eucgr.E00377 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3560849-3561848 Eucalyptus grandis
Eucgr.E00377 1.0kb downstream 1.0kb downstream 2296 true Chr05: 3561849-3564144 Eucalyptus grandis
Eucgr.E00377 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3563145-3564144 Eucalyptus grandis
Eucgr.E00377 2.0kb upstream 2.0kb upstream 3296 true Chr05: 3559849-3563144 Eucalyptus grandis
Eucgr.E00377 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3559849-3561848 Eucalyptus grandis
Eucgr.E00377 2.0kb downstream 2.0kb downstream 3296 true Chr05: 3561849-3565144 Eucalyptus grandis
Eucgr.E00377 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3563145-3565144 Eucalyptus grandis
Eucgr.E00377 5.0kb upstream 5.0kb upstream 6296 true Chr05: 3556849-3563144 Eucalyptus grandis
Eucgr.E00377 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3556849-3561848 Eucalyptus grandis
Eucgr.E00377 5.0kb downstream 5.0kb downstream 6296 true Chr05: 3561849-3568144 Eucalyptus grandis
Eucgr.E00377 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3563145-3568144 Eucalyptus grandis
Eucgr.E00377 10.0kb upstream 10.0kb upstream 11296 true Chr05: 3551849-3563144 Eucalyptus grandis
Eucgr.E00377 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3551849-3561848 Eucalyptus grandis
Eucgr.E00377 10.0kb downstream 10.0kb downstream 11296 true Chr05: 3561849-3573144 Eucalyptus grandis
Eucgr.E00377 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3563145-3573144 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063509 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.49848 0.0 18.5239    
cufflinks 0.708099 0.0 2.27969 Low  
cufflinks 15.6885 0.0 36.4584   High
cufflinks 0.455875 0.0 1.56536   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.82171 0.0 5.155    

0 Strain