Gene : Eucgr.E00349 E. grandis v2.0
Defline:  (1 of 1) PTHR10150 - DNA REPAIR ENDONUCLEASE XPF Genomic Order:  318
Name:  ? Eucgr.E00349 Secondary Identifier:  ? PAC:32031555
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00349 0.5kb upstream 0.5kb upstream 5757 true Chr05: 3296526-3302282 Eucalyptus grandis
Eucgr.E00349 0.5kb upstream 0.5kb upstream 500 false Chr05: 3296526-3297025 Eucalyptus grandis
Eucgr.E00349 0.5kb downstream 0.5kb downstream 5757 true Chr05: 3297026-3302782 Eucalyptus grandis
Eucgr.E00349 0.5kb downstream 0.5kb downstream 500 false Chr05: 3302283-3302782 Eucalyptus grandis
Eucgr.E00349 1.0kb upstream 1.0kb upstream 6257 true Chr05: 3296026-3302282 Eucalyptus grandis
Eucgr.E00349 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3296026-3297025 Eucalyptus grandis
Eucgr.E00349 1.0kb downstream 1.0kb downstream 6257 true Chr05: 3297026-3303282 Eucalyptus grandis
Eucgr.E00349 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3302283-3303282 Eucalyptus grandis
Eucgr.E00349 2.0kb upstream 2.0kb upstream 7257 true Chr05: 3295026-3302282 Eucalyptus grandis
Eucgr.E00349 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3295026-3297025 Eucalyptus grandis
Eucgr.E00349 2.0kb downstream 2.0kb downstream 7257 true Chr05: 3297026-3304282 Eucalyptus grandis
Eucgr.E00349 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3302283-3304282 Eucalyptus grandis
Eucgr.E00349 5.0kb upstream 5.0kb upstream 10257 true Chr05: 3292026-3302282 Eucalyptus grandis
Eucgr.E00349 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3292026-3297025 Eucalyptus grandis
Eucgr.E00349 5.0kb downstream 5.0kb downstream 10257 true Chr05: 3297026-3307282 Eucalyptus grandis
Eucgr.E00349 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3302283-3307282 Eucalyptus grandis
Eucgr.E00349 10.0kb upstream 10.0kb upstream 15257 true Chr05: 3287026-3302282 Eucalyptus grandis
Eucgr.E00349 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3287026-3297025 Eucalyptus grandis
Eucgr.E00349 10.0kb downstream 10.0kb downstream 15257 true Chr05: 3297026-3312282 Eucalyptus grandis
Eucgr.E00349 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3302283-3312282 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026556 5273 Angiosperm View MSA
124065772 5270 Rosid View MSA
123749861 5271 Pentapetalae View MSA
122792541 5272 Eudicot View MSA
121346199 5274 Embryophyte View MSA
123424869 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.73227 0.0 20.6035   High
cufflinks 1.73554 0.0 4.56681   Low
cufflinks 6.55436 0.0 16.8564    
cufflinks 4.03284 0.0 11.2842    
cufflinks 2.68708 0.0 6.63836    
cufflinks 5.44318 0.0 12.5119    

0 Strain