Gene : Eucgr.E00326 E. grandis v2.0
Defline:  (1 of 1) PTHR10046:SF24 - LON PROTEASE HOMOLOG 2, PEROXISOMAL Genomic Order:  297
Name:  ? Eucgr.E00326 Secondary Identifier:  ? PAC:32029925
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E00326 0.5kb upstream 0.5kb upstream 13329 true Chr05: 3044503-3057831 Eucalyptus grandis
Eucgr.E00326 0.5kb upstream 0.5kb upstream 500 false Chr05: 3057332-3057831 Eucalyptus grandis
Eucgr.E00326 0.5kb downstream 0.5kb downstream 13329 true Chr05: 3044003-3057331 Eucalyptus grandis
Eucgr.E00326 0.5kb downstream 0.5kb downstream 500 false Chr05: 3044003-3044502 Eucalyptus grandis
Eucgr.E00326 1.0kb upstream 1.0kb upstream 13829 true Chr05: 3044503-3058331 Eucalyptus grandis
Eucgr.E00326 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3057332-3058331 Eucalyptus grandis
Eucgr.E00326 1.0kb downstream 1.0kb downstream 13829 true Chr05: 3043503-3057331 Eucalyptus grandis
Eucgr.E00326 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3043503-3044502 Eucalyptus grandis
Eucgr.E00326 2.0kb upstream 2.0kb upstream 14829 true Chr05: 3044503-3059331 Eucalyptus grandis
Eucgr.E00326 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3057332-3059331 Eucalyptus grandis
Eucgr.E00326 2.0kb downstream 2.0kb downstream 14829 true Chr05: 3042503-3057331 Eucalyptus grandis
Eucgr.E00326 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3042503-3044502 Eucalyptus grandis
Eucgr.E00326 5.0kb upstream 5.0kb upstream 17829 true Chr05: 3044503-3062331 Eucalyptus grandis
Eucgr.E00326 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3057332-3062331 Eucalyptus grandis
Eucgr.E00326 5.0kb downstream 5.0kb downstream 17829 true Chr05: 3039503-3057331 Eucalyptus grandis
Eucgr.E00326 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3039503-3044502 Eucalyptus grandis
Eucgr.E00326 10.0kb upstream 10.0kb upstream 22829 true Chr05: 3044503-3067331 Eucalyptus grandis
Eucgr.E00326 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3057332-3067331 Eucalyptus grandis
Eucgr.E00326 10.0kb downstream 10.0kb downstream 22829 true Chr05: 3034503-3057331 Eucalyptus grandis
Eucgr.E00326 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3034503-3044502 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122787777 5272 Eudicot View MSA
124064687 5270 Rosid View MSA
123747145 5271 Pentapetalae View MSA
122044816 5273 Angiosperm View MSA
121344887 5274 Embryophyte View MSA
123425765 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.5681 0.0 138.064 High  
cufflinks 22.2583 0.0 49.6115    
cufflinks 44.0026 0.0 101.642 High  
cufflinks 42.8985 0.0 99.2095 High  
cufflinks 12.0388 0.0 26.637   Low
cufflinks 69.7561 0.0 166.453 High High

0 Strain