Gene : Eucgr.E01325 E. grandis v2.0
Defline:  (1 of 1) PTHR14986 - RURM1 PROTEIN Genomic Order:  1041
Name:  ? Eucgr.E01325 Secondary Identifier:  ? PAC:32029662
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01325 0.5kb upstream 0.5kb upstream 2459 true Chr05: 13816913-13819371 Eucalyptus grandis
Eucgr.E01325 0.5kb upstream 0.5kb upstream 500 false Chr05: 13818872-13819371 Eucalyptus grandis
Eucgr.E01325 0.5kb downstream 0.5kb downstream 2459 true Chr05: 13816413-13818871 Eucalyptus grandis
Eucgr.E01325 0.5kb downstream 0.5kb downstream 500 false Chr05: 13816413-13816912 Eucalyptus grandis
Eucgr.E01325 1.0kb upstream 1.0kb upstream 2959 true Chr05: 13816913-13819871 Eucalyptus grandis
Eucgr.E01325 1.0kb upstream 1.0kb upstream 1000 false Chr05: 13818872-13819871 Eucalyptus grandis
Eucgr.E01325 1.0kb downstream 1.0kb downstream 2959 true Chr05: 13815913-13818871 Eucalyptus grandis
Eucgr.E01325 1.0kb downstream 1.0kb downstream 1000 false Chr05: 13815913-13816912 Eucalyptus grandis
Eucgr.E01325 2.0kb upstream 2.0kb upstream 3959 true Chr05: 13816913-13820871 Eucalyptus grandis
Eucgr.E01325 2.0kb upstream 2.0kb upstream 2000 false Chr05: 13818872-13820871 Eucalyptus grandis
Eucgr.E01325 2.0kb downstream 2.0kb downstream 3959 true Chr05: 13814913-13818871 Eucalyptus grandis
Eucgr.E01325 2.0kb downstream 2.0kb downstream 2000 false Chr05: 13814913-13816912 Eucalyptus grandis
Eucgr.E01325 5.0kb upstream 5.0kb upstream 6959 true Chr05: 13816913-13823871 Eucalyptus grandis
Eucgr.E01325 5.0kb upstream 5.0kb upstream 5000 false Chr05: 13818872-13823871 Eucalyptus grandis
Eucgr.E01325 5.0kb downstream 5.0kb downstream 6959 true Chr05: 13811913-13818871 Eucalyptus grandis
Eucgr.E01325 5.0kb downstream 5.0kb downstream 5000 false Chr05: 13811913-13816912 Eucalyptus grandis
Eucgr.E01325 10.0kb upstream 10.0kb upstream 11959 true Chr05: 13816913-13828871 Eucalyptus grandis
Eucgr.E01325 10.0kb upstream 10.0kb upstream 10000 false Chr05: 13818872-13828871 Eucalyptus grandis
Eucgr.E01325 10.0kb downstream 10.0kb downstream 11959 true Chr05: 13806913-13818871 Eucalyptus grandis
Eucgr.E01325 10.0kb downstream 10.0kb downstream 10000 false Chr05: 13806913-13816912 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062744 5270 Rosid View MSA
123740822 5271 Pentapetalae View MSA
122787578 5272 Eudicot View MSA
122042702 5273 Angiosperm View MSA
121349915 5274 Embryophyte View MSA
123424285 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.7536 0.0 85.9063    
cufflinks 19.4357 0.0 46.3291    
cufflinks 22.6219 0.0 69.0617    
cufflinks 24.08 0.0 56.9461    
cufflinks 45.0372 0.0 125.37 High High
cufflinks 25.4503 0.0 66.5635    

0 Strain