Gene : Eucgr.E01326 E. grandis v2.0
Defline:  (1 of 1) PTHR18896:SF65 - PHOSPHOLIPASE D BETA 1-RELATED Genomic Order:  1042
Name:  ? Eucgr.E01326 Secondary Identifier:  ? PAC:32028647
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis LIPASYN-PWY Eucalyptus grandis pathologic  
Egrandis PWY-3561 Eucalyptus grandis pathologic  
Egrandis PWY-7039 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01326 0.5kb upstream 0.5kb upstream 7449 true Chr05: 13821366-13828814 Eucalyptus grandis
Eucgr.E01326 0.5kb upstream 0.5kb upstream 500 false Chr05: 13828315-13828814 Eucalyptus grandis
Eucgr.E01326 0.5kb downstream 0.5kb downstream 7449 true Chr05: 13820866-13828314 Eucalyptus grandis
Eucgr.E01326 0.5kb downstream 0.5kb downstream 500 false Chr05: 13820866-13821365 Eucalyptus grandis
Eucgr.E01326 1.0kb upstream 1.0kb upstream 7949 true Chr05: 13821366-13829314 Eucalyptus grandis
Eucgr.E01326 1.0kb upstream 1.0kb upstream 1000 false Chr05: 13828315-13829314 Eucalyptus grandis
Eucgr.E01326 1.0kb downstream 1.0kb downstream 7949 true Chr05: 13820366-13828314 Eucalyptus grandis
Eucgr.E01326 1.0kb downstream 1.0kb downstream 1000 false Chr05: 13820366-13821365 Eucalyptus grandis
Eucgr.E01326 2.0kb upstream 2.0kb upstream 8949 true Chr05: 13821366-13830314 Eucalyptus grandis
Eucgr.E01326 2.0kb upstream 2.0kb upstream 2000 false Chr05: 13828315-13830314 Eucalyptus grandis
Eucgr.E01326 2.0kb downstream 2.0kb downstream 8949 true Chr05: 13819366-13828314 Eucalyptus grandis
Eucgr.E01326 2.0kb downstream 2.0kb downstream 2000 false Chr05: 13819366-13821365 Eucalyptus grandis
Eucgr.E01326 5.0kb upstream 5.0kb upstream 11949 true Chr05: 13821366-13833314 Eucalyptus grandis
Eucgr.E01326 5.0kb upstream 5.0kb upstream 5000 false Chr05: 13828315-13833314 Eucalyptus grandis
Eucgr.E01326 5.0kb downstream 5.0kb downstream 11949 true Chr05: 13816366-13828314 Eucalyptus grandis
Eucgr.E01326 5.0kb downstream 5.0kb downstream 5000 false Chr05: 13816366-13821365 Eucalyptus grandis
Eucgr.E01326 10.0kb upstream 10.0kb upstream 16949 true Chr05: 13821366-13838314 Eucalyptus grandis
Eucgr.E01326 10.0kb upstream 10.0kb upstream 10000 false Chr05: 13828315-13838314 Eucalyptus grandis
Eucgr.E01326 10.0kb downstream 10.0kb downstream 16949 true Chr05: 13811366-13828314 Eucalyptus grandis
Eucgr.E01326 10.0kb downstream 10.0kb downstream 10000 false Chr05: 13811366-13821365 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072300 5270 Rosid View MSA
123749008 5271 Pentapetalae View MSA
122790888 5272 Eudicot View MSA
122043294 5273 Angiosperm View MSA
121349961 5274 Embryophyte View MSA
123381517 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0372 0.0 35.4925    
cufflinks 19.0029 0.0 42.1938    
cufflinks 17.9779 0.0 39.867    
cufflinks 24.9197 0.0 55.8638   High
cufflinks 8.97908 0.0 19.9462   Low
cufflinks 17.5954 0.0 38.9833    

0 Strain