Gene : Eucgr.E01213 E. grandis v2.0
Defline:  (1 of 2) PTHR31803:SF4 - UBIQUINOL OXIDASE 1A, MITOCHONDRIAL-RELATED Genomic Order:  953
Name:  ? Eucgr.E01213 Secondary Identifier:  ? PAC:32028866
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-4302 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01213 0.5kb upstream 0.5kb upstream 3937 true Chr05: 11964598-11968534 Eucalyptus grandis
Eucgr.E01213 0.5kb upstream 0.5kb upstream 500 false Chr05: 11968035-11968534 Eucalyptus grandis
Eucgr.E01213 0.5kb downstream 0.5kb downstream 3937 true Chr05: 11964098-11968034 Eucalyptus grandis
Eucgr.E01213 0.5kb downstream 0.5kb downstream 500 false Chr05: 11964098-11964597 Eucalyptus grandis
Eucgr.E01213 1.0kb upstream 1.0kb upstream 4437 true Chr05: 11964598-11969034 Eucalyptus grandis
Eucgr.E01213 1.0kb upstream 1.0kb upstream 1000 false Chr05: 11968035-11969034 Eucalyptus grandis
Eucgr.E01213 1.0kb downstream 1.0kb downstream 4437 true Chr05: 11963598-11968034 Eucalyptus grandis
Eucgr.E01213 1.0kb downstream 1.0kb downstream 1000 false Chr05: 11963598-11964597 Eucalyptus grandis
Eucgr.E01213 2.0kb upstream 2.0kb upstream 5437 true Chr05: 11964598-11970034 Eucalyptus grandis
Eucgr.E01213 2.0kb upstream 2.0kb upstream 2000 false Chr05: 11968035-11970034 Eucalyptus grandis
Eucgr.E01213 2.0kb downstream 2.0kb downstream 5437 true Chr05: 11962598-11968034 Eucalyptus grandis
Eucgr.E01213 2.0kb downstream 2.0kb downstream 2000 false Chr05: 11962598-11964597 Eucalyptus grandis
Eucgr.E01213 5.0kb upstream 5.0kb upstream 8437 true Chr05: 11964598-11973034 Eucalyptus grandis
Eucgr.E01213 5.0kb upstream 5.0kb upstream 5000 false Chr05: 11968035-11973034 Eucalyptus grandis
Eucgr.E01213 5.0kb downstream 5.0kb downstream 8437 true Chr05: 11959598-11968034 Eucalyptus grandis
Eucgr.E01213 5.0kb downstream 5.0kb downstream 5000 false Chr05: 11959598-11964597 Eucalyptus grandis
Eucgr.E01213 10.0kb upstream 10.0kb upstream 13437 true Chr05: 11964598-11978034 Eucalyptus grandis
Eucgr.E01213 10.0kb upstream 10.0kb upstream 10000 false Chr05: 11968035-11978034 Eucalyptus grandis
Eucgr.E01213 10.0kb downstream 10.0kb downstream 13437 true Chr05: 11954598-11968034 Eucalyptus grandis
Eucgr.E01213 10.0kb downstream 10.0kb downstream 10000 false Chr05: 11954598-11964597 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071385 5270 Rosid View MSA
123743047 5271 Pentapetalae View MSA
122794845 5272 Eudicot View MSA
122048992 5273 Angiosperm View MSA
121347153 5274 Embryophyte View MSA
123426662 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.23474 0.0 14.7526    
cufflinks 10.8444 0.0 28.3635    
cufflinks 3.89672 0.0 10.686   Low
cufflinks 15.6741 0.0 40.4101   High
cufflinks 5.94282 0.0 14.8734    
cufflinks 5.86157 0.0 13.8913    

0 Strain