Gene : Eucgr.E01215 E. grandis v2.0
Defline:  (1 of 3) PTHR11819 - SODIUM/SOLUTE SYMPORTER Genomic Order:  955
Name:  ? Eucgr.E01215 Secondary Identifier:  ? PAC:32030273
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01215 0.5kb upstream 0.5kb upstream 4593 true Chr05: 11992825-11997417 Eucalyptus grandis
Eucgr.E01215 0.5kb upstream 0.5kb upstream 500 false Chr05: 11992825-11993324 Eucalyptus grandis
Eucgr.E01215 0.5kb downstream 0.5kb downstream 4593 true Chr05: 11993325-11997917 Eucalyptus grandis
Eucgr.E01215 0.5kb downstream 0.5kb downstream 500 false Chr05: 11997418-11997917 Eucalyptus grandis
Eucgr.E01215 1.0kb upstream 1.0kb upstream 5093 true Chr05: 11992325-11997417 Eucalyptus grandis
Eucgr.E01215 1.0kb upstream 1.0kb upstream 1000 false Chr05: 11992325-11993324 Eucalyptus grandis
Eucgr.E01215 1.0kb downstream 1.0kb downstream 5093 true Chr05: 11993325-11998417 Eucalyptus grandis
Eucgr.E01215 1.0kb downstream 1.0kb downstream 1000 false Chr05: 11997418-11998417 Eucalyptus grandis
Eucgr.E01215 2.0kb upstream 2.0kb upstream 6093 true Chr05: 11991325-11997417 Eucalyptus grandis
Eucgr.E01215 2.0kb upstream 2.0kb upstream 2000 false Chr05: 11991325-11993324 Eucalyptus grandis
Eucgr.E01215 2.0kb downstream 2.0kb downstream 6093 true Chr05: 11993325-11999417 Eucalyptus grandis
Eucgr.E01215 2.0kb downstream 2.0kb downstream 2000 false Chr05: 11997418-11999417 Eucalyptus grandis
Eucgr.E01215 5.0kb upstream 5.0kb upstream 9093 true Chr05: 11988325-11997417 Eucalyptus grandis
Eucgr.E01215 5.0kb upstream 5.0kb upstream 5000 false Chr05: 11988325-11993324 Eucalyptus grandis
Eucgr.E01215 5.0kb downstream 5.0kb downstream 9093 true Chr05: 11993325-12002417 Eucalyptus grandis
Eucgr.E01215 5.0kb downstream 5.0kb downstream 5000 false Chr05: 11997418-12002417 Eucalyptus grandis
Eucgr.E01215 10.0kb upstream 10.0kb upstream 14093 true Chr05: 11983325-11997417 Eucalyptus grandis
Eucgr.E01215 10.0kb upstream 10.0kb upstream 10000 false Chr05: 11983325-11993324 Eucalyptus grandis
Eucgr.E01215 10.0kb downstream 10.0kb downstream 14093 true Chr05: 11993325-12007417 Eucalyptus grandis
Eucgr.E01215 10.0kb downstream 10.0kb downstream 10000 false Chr05: 11997418-12007417 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065126 5270 Rosid View MSA
123740306 5271 Pentapetalae View MSA
122788799 5272 Eudicot View MSA
122046935 5273 Angiosperm View MSA
121346289 5274 Embryophyte View MSA
123427439 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.366359 0.0 1.15459 Low  
cufflinks 0.315837 0.0 1.01683 Low  
cufflinks 0.328221 0.0 1.05196 Low  
cufflinks 1.24374 0.0 3.42525   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.311353 0.0 1.00133 Low  

0 Strain