Gene : Eucgr.E01212 E. grandis v2.0
Defline:  (1 of 4) PTHR22762:SF7 - ALPHA GLUCOSIDASE-LIKE PROTEIN Genomic Order:  952
Name:  ? Eucgr.E01212 Secondary Identifier:  ? PAC:32029807
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01212 0.5kb upstream 0.5kb upstream 23586 true Chr05: 11939839-11963424 Eucalyptus grandis
Eucgr.E01212 0.5kb upstream 0.5kb upstream 500 false Chr05: 11939839-11940338 Eucalyptus grandis
Eucgr.E01212 0.5kb downstream 0.5kb downstream 23586 true Chr05: 11940339-11963924 Eucalyptus grandis
Eucgr.E01212 0.5kb downstream 0.5kb downstream 500 false Chr05: 11963425-11963924 Eucalyptus grandis
Eucgr.E01212 1.0kb upstream 1.0kb upstream 24086 true Chr05: 11939339-11963424 Eucalyptus grandis
Eucgr.E01212 1.0kb upstream 1.0kb upstream 1000 false Chr05: 11939339-11940338 Eucalyptus grandis
Eucgr.E01212 1.0kb downstream 1.0kb downstream 24086 true Chr05: 11940339-11964424 Eucalyptus grandis
Eucgr.E01212 1.0kb downstream 1.0kb downstream 1000 false Chr05: 11963425-11964424 Eucalyptus grandis
Eucgr.E01212 2.0kb upstream 2.0kb upstream 25086 true Chr05: 11938339-11963424 Eucalyptus grandis
Eucgr.E01212 2.0kb upstream 2.0kb upstream 2000 false Chr05: 11938339-11940338 Eucalyptus grandis
Eucgr.E01212 2.0kb downstream 2.0kb downstream 25086 true Chr05: 11940339-11965424 Eucalyptus grandis
Eucgr.E01212 2.0kb downstream 2.0kb downstream 2000 false Chr05: 11963425-11965424 Eucalyptus grandis
Eucgr.E01212 5.0kb upstream 5.0kb upstream 28086 true Chr05: 11935339-11963424 Eucalyptus grandis
Eucgr.E01212 5.0kb upstream 5.0kb upstream 5000 false Chr05: 11935339-11940338 Eucalyptus grandis
Eucgr.E01212 5.0kb downstream 5.0kb downstream 28086 true Chr05: 11940339-11968424 Eucalyptus grandis
Eucgr.E01212 5.0kb downstream 5.0kb downstream 5000 false Chr05: 11963425-11968424 Eucalyptus grandis
Eucgr.E01212 10.0kb upstream 10.0kb upstream 33086 true Chr05: 11930339-11963424 Eucalyptus grandis
Eucgr.E01212 10.0kb upstream 10.0kb upstream 10000 false Chr05: 11930339-11940338 Eucalyptus grandis
Eucgr.E01212 10.0kb downstream 10.0kb downstream 33086 true Chr05: 11940339-11973424 Eucalyptus grandis
Eucgr.E01212 10.0kb downstream 10.0kb downstream 10000 false Chr05: 11963425-11973424 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066152 5270 Rosid View MSA
123740745 5271 Pentapetalae View MSA
122786670 5272 Eudicot View MSA
122042416 5273 Angiosperm View MSA
121343930 5274 Embryophyte View MSA
123379942 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.30813 0.0 16.8516    
cufflinks 2.74084 0.0 6.57582   Low
cufflinks 10.5131 0.0 23.7136    
cufflinks 2.88912 0.0 6.88007   Low
cufflinks 6.33638 0.0 14.678    
cufflinks 10.6506 0.0 24.0113    

0 Strain