Gene : Eucgr.E01113 E. grandis v2.0
Defline:  (1 of 3) PTHR33288:SF3 - APOCYTOCHROME F Genomic Order:  877
Name:  ? Eucgr.E01113 Secondary Identifier:  ? PAC:32029079
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01113 0.5kb upstream 0.5kb upstream 1436 true Chr05: 10761124-10762559 Eucalyptus grandis
Eucgr.E01113 0.5kb upstream 0.5kb upstream 500 false Chr05: 10762060-10762559 Eucalyptus grandis
Eucgr.E01113 0.5kb downstream 0.5kb downstream 1436 true Chr05: 10760624-10762059 Eucalyptus grandis
Eucgr.E01113 0.5kb downstream 0.5kb downstream 500 false Chr05: 10760624-10761123 Eucalyptus grandis
Eucgr.E01113 1.0kb upstream 1.0kb upstream 1936 true Chr05: 10761124-10763059 Eucalyptus grandis
Eucgr.E01113 1.0kb upstream 1.0kb upstream 1000 false Chr05: 10762060-10763059 Eucalyptus grandis
Eucgr.E01113 1.0kb downstream 1.0kb downstream 1936 true Chr05: 10760124-10762059 Eucalyptus grandis
Eucgr.E01113 1.0kb downstream 1.0kb downstream 1000 false Chr05: 10760124-10761123 Eucalyptus grandis
Eucgr.E01113 2.0kb upstream 2.0kb upstream 2936 true Chr05: 10761124-10764059 Eucalyptus grandis
Eucgr.E01113 2.0kb upstream 2.0kb upstream 2000 false Chr05: 10762060-10764059 Eucalyptus grandis
Eucgr.E01113 2.0kb downstream 2.0kb downstream 2936 true Chr05: 10759124-10762059 Eucalyptus grandis
Eucgr.E01113 2.0kb downstream 2.0kb downstream 2000 false Chr05: 10759124-10761123 Eucalyptus grandis
Eucgr.E01113 5.0kb upstream 5.0kb upstream 5936 true Chr05: 10761124-10767059 Eucalyptus grandis
Eucgr.E01113 5.0kb upstream 5.0kb upstream 5000 false Chr05: 10762060-10767059 Eucalyptus grandis
Eucgr.E01113 5.0kb downstream 5.0kb downstream 5936 true Chr05: 10756124-10762059 Eucalyptus grandis
Eucgr.E01113 5.0kb downstream 5.0kb downstream 5000 false Chr05: 10756124-10761123 Eucalyptus grandis
Eucgr.E01113 10.0kb upstream 10.0kb upstream 10936 true Chr05: 10761124-10772059 Eucalyptus grandis
Eucgr.E01113 10.0kb upstream 10.0kb upstream 10000 false Chr05: 10762060-10772059 Eucalyptus grandis
Eucgr.E01113 10.0kb downstream 10.0kb downstream 10936 true Chr05: 10751124-10762059 Eucalyptus grandis
Eucgr.E01113 10.0kb downstream 10.0kb downstream 10000 false Chr05: 10751124-10761123 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050483 5270 Rosid View MSA
123752202 5271 Pentapetalae View MSA
122795112 5272 Eudicot View MSA
122046539 5273 Angiosperm View MSA
121351197 5274 Embryophyte View MSA
123425549 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.44131 0.0 14.1938    
cufflinks 0.723335 0.0 2.32875 Low  
cufflinks 1.36361 0.0 4.08586    
cufflinks 0.395693 0.0 1.37911 Low Low
cufflinks 0.971277 0.0 3.00422    
cufflinks 10.6519 0.0 26.2141   High

0 Strain