Gene : Eucgr.E01133 E. grandis v2.0
Defline:  (1 of 2) PTHR21433 - TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA Genomic Order:  888
Name:  ? Eucgr.E01133 Secondary Identifier:  ? PAC:32028686
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01133 0.5kb upstream 0.5kb upstream 4898 true Chr05: 11001061-11005958 Eucalyptus grandis
Eucgr.E01133 0.5kb upstream 0.5kb upstream 500 false Chr05: 11005459-11005958 Eucalyptus grandis
Eucgr.E01133 0.5kb downstream 0.5kb downstream 4898 true Chr05: 11000561-11005458 Eucalyptus grandis
Eucgr.E01133 0.5kb downstream 0.5kb downstream 500 false Chr05: 11000561-11001060 Eucalyptus grandis
Eucgr.E01133 1.0kb upstream 1.0kb upstream 5398 true Chr05: 11001061-11006458 Eucalyptus grandis
Eucgr.E01133 1.0kb upstream 1.0kb upstream 1000 false Chr05: 11005459-11006458 Eucalyptus grandis
Eucgr.E01133 1.0kb downstream 1.0kb downstream 5398 true Chr05: 11000061-11005458 Eucalyptus grandis
Eucgr.E01133 1.0kb downstream 1.0kb downstream 1000 false Chr05: 11000061-11001060 Eucalyptus grandis
Eucgr.E01133 2.0kb upstream 2.0kb upstream 6398 true Chr05: 11001061-11007458 Eucalyptus grandis
Eucgr.E01133 2.0kb upstream 2.0kb upstream 2000 false Chr05: 11005459-11007458 Eucalyptus grandis
Eucgr.E01133 2.0kb downstream 2.0kb downstream 6398 true Chr05: 10999061-11005458 Eucalyptus grandis
Eucgr.E01133 2.0kb downstream 2.0kb downstream 2000 false Chr05: 10999061-11001060 Eucalyptus grandis
Eucgr.E01133 5.0kb upstream 5.0kb upstream 9398 true Chr05: 11001061-11010458 Eucalyptus grandis
Eucgr.E01133 5.0kb upstream 5.0kb upstream 5000 false Chr05: 11005459-11010458 Eucalyptus grandis
Eucgr.E01133 5.0kb downstream 5.0kb downstream 9398 true Chr05: 10996061-11005458 Eucalyptus grandis
Eucgr.E01133 5.0kb downstream 5.0kb downstream 5000 false Chr05: 10996061-11001060 Eucalyptus grandis
Eucgr.E01133 10.0kb upstream 10.0kb upstream 14398 true Chr05: 11001061-11015458 Eucalyptus grandis
Eucgr.E01133 10.0kb upstream 10.0kb upstream 10000 false Chr05: 11005459-11015458 Eucalyptus grandis
Eucgr.E01133 10.0kb downstream 10.0kb downstream 14398 true Chr05: 10991061-11005458 Eucalyptus grandis
Eucgr.E01133 10.0kb downstream 10.0kb downstream 10000 false Chr05: 10991061-11001060 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065114 5270 Rosid View MSA
123747288 5271 Pentapetalae View MSA
122787986 5272 Eudicot View MSA
122046309 5273 Angiosperm View MSA
121351059 5274 Embryophyte View MSA
123427435 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.36836 0.0 15.1975    
cufflinks 2.70199 0.0 7.55556   Low
cufflinks 8.04203 0.0 24.7727    
cufflinks 9.39301 0.0 25.9635   High
cufflinks 5.9399 0.0 14.8094    
cufflinks 2.38989 0.0 6.722   Low

0 Strain