Gene : Eucgr.E01030 E. grandis v2.0
Defline:  (1 of 1) PTHR21320:SF0 - METHYLTRANSFERASE-LIKE PROTEIN 17, MITOCHONDRIAL Genomic Order:  803
Name:  ? Eucgr.E01030 Secondary Identifier:  ? PAC:32031421
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01030 0.5kb upstream 0.5kb upstream 5520 true Chr05: 9794261-9799780 Eucalyptus grandis
Eucgr.E01030 0.5kb upstream 0.5kb upstream 500 false Chr05: 9794261-9794760 Eucalyptus grandis
Eucgr.E01030 0.5kb downstream 0.5kb downstream 5520 true Chr05: 9794761-9800280 Eucalyptus grandis
Eucgr.E01030 0.5kb downstream 0.5kb downstream 500 false Chr05: 9799781-9800280 Eucalyptus grandis
Eucgr.E01030 1.0kb upstream 1.0kb upstream 6020 true Chr05: 9793761-9799780 Eucalyptus grandis
Eucgr.E01030 1.0kb upstream 1.0kb upstream 1000 false Chr05: 9793761-9794760 Eucalyptus grandis
Eucgr.E01030 1.0kb downstream 1.0kb downstream 6020 true Chr05: 9794761-9800780 Eucalyptus grandis
Eucgr.E01030 1.0kb downstream 1.0kb downstream 1000 false Chr05: 9799781-9800780 Eucalyptus grandis
Eucgr.E01030 2.0kb upstream 2.0kb upstream 7020 true Chr05: 9792761-9799780 Eucalyptus grandis
Eucgr.E01030 2.0kb upstream 2.0kb upstream 2000 false Chr05: 9792761-9794760 Eucalyptus grandis
Eucgr.E01030 2.0kb downstream 2.0kb downstream 7020 true Chr05: 9794761-9801780 Eucalyptus grandis
Eucgr.E01030 2.0kb downstream 2.0kb downstream 2000 false Chr05: 9799781-9801780 Eucalyptus grandis
Eucgr.E01030 5.0kb upstream 5.0kb upstream 10020 true Chr05: 9789761-9799780 Eucalyptus grandis
Eucgr.E01030 5.0kb upstream 5.0kb upstream 5000 false Chr05: 9789761-9794760 Eucalyptus grandis
Eucgr.E01030 5.0kb downstream 5.0kb downstream 10020 true Chr05: 9794761-9804780 Eucalyptus grandis
Eucgr.E01030 5.0kb downstream 5.0kb downstream 5000 false Chr05: 9799781-9804780 Eucalyptus grandis
Eucgr.E01030 10.0kb upstream 10.0kb upstream 15020 true Chr05: 9784761-9799780 Eucalyptus grandis
Eucgr.E01030 10.0kb upstream 10.0kb upstream 10000 false Chr05: 9784761-9794760 Eucalyptus grandis
Eucgr.E01030 10.0kb downstream 10.0kb downstream 15020 true Chr05: 9794761-9809780 Eucalyptus grandis
Eucgr.E01030 10.0kb downstream 10.0kb downstream 10000 false Chr05: 9799781-9809780 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061439 5270 Rosid View MSA
123738649 5271 Pentapetalae View MSA
122785765 5272 Eudicot View MSA
122046431 5273 Angiosperm View MSA
121344700 5274 Embryophyte View MSA
123426720 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.70131 0.0 18.062   High
cufflinks 1.52214 0.0 4.18575   Low
cufflinks 3.9572 0.0 9.89733    
cufflinks 3.35019 0.0 8.51117    
cufflinks 2.07718 0.0 5.53679    
cufflinks 7.68368 0.0 18.0291   High

0 Strain