Gene : Eucgr.E01022 E. grandis v2.0
Defline:  (1 of 3) PTHR32002:SF4 - PROTEIN NLP6-RELATED Genomic Order:  795
Name:  ? Eucgr.E01022 Secondary Identifier:  ? PAC:32028273
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.E01022 0.5kb upstream 0.5kb upstream 2989 true Chr05: 9730121-9733109 Eucalyptus grandis
Eucgr.E01022 0.5kb upstream 0.5kb upstream 500 false Chr05: 9730121-9730620 Eucalyptus grandis
Eucgr.E01022 0.5kb downstream 0.5kb downstream 2989 true Chr05: 9730621-9733609 Eucalyptus grandis
Eucgr.E01022 0.5kb downstream 0.5kb downstream 500 false Chr05: 9733110-9733609 Eucalyptus grandis
Eucgr.E01022 1.0kb upstream 1.0kb upstream 3489 true Chr05: 9729621-9733109 Eucalyptus grandis
Eucgr.E01022 1.0kb upstream 1.0kb upstream 1000 false Chr05: 9729621-9730620 Eucalyptus grandis
Eucgr.E01022 1.0kb downstream 1.0kb downstream 3489 true Chr05: 9730621-9734109 Eucalyptus grandis
Eucgr.E01022 1.0kb downstream 1.0kb downstream 1000 false Chr05: 9733110-9734109 Eucalyptus grandis
Eucgr.E01022 2.0kb upstream 2.0kb upstream 4489 true Chr05: 9728621-9733109 Eucalyptus grandis
Eucgr.E01022 2.0kb upstream 2.0kb upstream 2000 false Chr05: 9728621-9730620 Eucalyptus grandis
Eucgr.E01022 2.0kb downstream 2.0kb downstream 4489 true Chr05: 9730621-9735109 Eucalyptus grandis
Eucgr.E01022 2.0kb downstream 2.0kb downstream 2000 false Chr05: 9733110-9735109 Eucalyptus grandis
Eucgr.E01022 5.0kb upstream 5.0kb upstream 7489 true Chr05: 9725621-9733109 Eucalyptus grandis
Eucgr.E01022 5.0kb upstream 5.0kb upstream 5000 false Chr05: 9725621-9730620 Eucalyptus grandis
Eucgr.E01022 5.0kb downstream 5.0kb downstream 7489 true Chr05: 9730621-9738109 Eucalyptus grandis
Eucgr.E01022 5.0kb downstream 5.0kb downstream 5000 false Chr05: 9733110-9738109 Eucalyptus grandis
Eucgr.E01022 10.0kb upstream 10.0kb upstream 12489 true Chr05: 9720621-9733109 Eucalyptus grandis
Eucgr.E01022 10.0kb upstream 10.0kb upstream 10000 false Chr05: 9720621-9730620 Eucalyptus grandis
Eucgr.E01022 10.0kb downstream 10.0kb downstream 12489 true Chr05: 9730621-9743109 Eucalyptus grandis
Eucgr.E01022 10.0kb downstream 10.0kb downstream 10000 false Chr05: 9733110-9743109 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040942 5273 Angiosperm View MSA
124067661 5270 Rosid View MSA
123749691 5271 Pentapetalae View MSA
122793783 5272 Eudicot View MSA
121350940 5274 Embryophyte View MSA
123428170 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.83646 0.0 7.09178    
cufflinks 1.26516 0.0 3.4029    
cufflinks 3.94084 0.0 9.49788   High
cufflinks 2.00331 0.0 5.14587    
cufflinks 0.892235 0.0 2.49233   Low
cufflinks 3.17124 0.0 7.8818    

0 Strain